RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 NOX1Q9Y5S8 564 aa12.43□□□□□ -0.42
SLIRP-207ENST00000556831 MAGED1Q9Y5V3 778 aaPredicted RBP12.43□□□□□ -0.42
SLIRP-207ENST00000556831 OR5H1A6NKK0 313 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 CLOCKO15516 846 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 SERPINI2O75830 405 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 CH25HO95992 272 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 SERPINA1P01009 418 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 CD3EP07766 207 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 ADORA3P0DMS8 318 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 CDH2P19022 906 aaPredicted RBP12.42□□□□□ -0.42
SLIRP-207ENST00000556831 MPGP29372 298 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 RBM34P42696 430 aaKnown RBP12.42□□□□□ -0.42
SLIRP-207ENST00000556831 SELENOPP49908 381 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 P2RY4P51582 365 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 POU3F1Q03052 451 aaPredicted RBP12.42□□□□□ -0.42
SLIRP-207ENST00000556831 ST3GAL3Q11203 375 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 FOXD4Q12950 439 aaPredicted RBP12.42□□□□□ -0.42
SLIRP-207ENST00000556831 SAMD4BQ5PRF9 694 aaKnown RBP12.42□□□□□ -0.42
SLIRP-207ENST00000556831 TSPO2Q5TGU0 170 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 C8orf82Q6P1X6 216 aaPredicted RBP12.42□□□□□ -0.42
SLIRP-207ENST00000556831 PGAM4Q8N0Y7 254 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 GPR137CQ8N3F9 429 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 C17orf78Q8N4C9 275 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 PIK3C3Q8NEB9 887 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 C1orf162Q8NEQ5 155 aaPredicted RBP12.42□□□□□ -0.42
SLIRP-207ENST00000556831 OR5J2Q8NH18 312 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 PRRC1Q96M27 445 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 HS6ST2Q96MM7 605 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 ALKBH3Q96Q83 286 aaPredicted RBP12.42□□□□□ -0.42
SLIRP-207ENST00000556831 FKRPQ9H9S5 495 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 B3GAT2Q9NPZ5 323 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 MRPL39Q9NYK5 338 aaKnown RBP12.42□□□□□ -0.42
SLIRP-207ENST00000556831 SEC14L4Q9UDX3 406 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 RIMS3Q9UJD0 308 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 ZNF229Q9UJW7 825 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 SAMD4AQ9UPU9 718 aaKnown RBP12.42□□□□□ -0.42
SLIRP-207ENST00000556831 MED31Q9Y3C7 131 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 RNF115Q9Y4L5 304 aa12.42□□□□□ -0.42
SLIRP-207ENST00000556831 VPS13CQ709C8 3753 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 ZNF726A6NNF4 738 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 WNT11O96014 354 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 BGLAPP02818 100 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 TCN1P20061 433 aaPredicted RBP12.41□□□□□ -0.42
SLIRP-207ENST00000556831 ART1P52961 327 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 SH3BGRP55822 239 aaPredicted RBP12.41□□□□□ -0.42
SLIRP-207ENST00000556831 PIN1Q13526 163 aaPredicted RBP12.41□□□□□ -0.42
SLIRP-207ENST00000556831 ZNF74Q16587 644 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 TMEM108Q6UXF1 575 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 ZNF704Q6ZNC4 412 aaPredicted RBP12.41□□□□□ -0.42
SLIRP-207ENST00000556831 C20orf204Q6ZNR8 217 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 TRPM8Q7Z2W7 1104 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 EPHX4Q8IUS5 362 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 RNF148Q8N7C7 305 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 ZIC4Q8N9L1 334 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 OR52N5Q8NH56 324 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 TMEM239Q8WW34 195 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 HSH2DQ96JZ2 352 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 MOGAT1Q96PD6 335 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 FNDC11Q9BVV2 318 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 PLEKHF2Q9H8W4 249 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 CCM2LQ9NUG4 571 aaPredicted RBP12.41□□□□□ -0.42
SLIRP-207ENST00000556831 EGFL7Q9UHF1 273 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 MAGEL2Q9UJ55 1249 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 AMDHD2Q9Y303 409 aa12.41□□□□□ -0.42
SLIRP-207ENST00000556831 FAM32AQ9Y421 112 aaKnown RBP12.41□□□□□ -0.42
SLIRP-207ENST00000556831 ZNF469Q96JG9 3925 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-207ENST00000556831 C11orf98E9PRG8 122 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 KLF4O43474 513 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 RNF13O43567 381 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 FZD7O75084 574 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 MT-ND1P03886 318 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 ITGA5P08648 1049 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 NCK1P16333 377 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 NTF4P34130 210 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 IST1P53990 364 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 UBE2NP61088 152 aaKnown RBP12.4□□□□□ -0.42
SLIRP-207ENST00000556831 KRT72Q14CN4 511 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 C1QTNF12Q5T7M4 302 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 GLYATQ6IB77 296 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 LINC00114Q6XXX2 140 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 WDR88Q6ZMY6 472 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 CBLL1Q75N03 491 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 RRM2BQ7LG56 351 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 PXKQ7Z7A4 578 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 VTCN1Q7Z7D3 282 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 DEPDC4Q8N2C3 294 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 ANKK1Q8NFD2 765 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 TMEM255BQ8WV15 326 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 SGTBQ96EQ0 304 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 HS3ST6Q96QI5 342 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 CCL19Q99731 98 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 LINC00470Q9BZP3 86 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 ARL8BQ9NVJ2 186 aa12.4□□□□□ -0.42
SLIRP-207ENST00000556831 LOC102725191A0A1B0GVB3 256 aa12.39□□□□□ -0.43
SLIRP-207ENST00000556831 MCIDASD6RGH6 385 aa12.39□□□□□ -0.43
SLIRP-207ENST00000556831 LRRN3E7EW58 273 aa12.39□□□□□ -0.43
SLIRP-207ENST00000556831 PLPP3O14495 311 aa12.39□□□□□ -0.43
SLIRP-207ENST00000556831 PRPS1P60891 318 aa12.39□□□□□ -0.43
SLIRP-207ENST00000556831 SLC25A3Q00325 362 aa12.39□□□□□ -0.43
SLIRP-207ENST00000556831 ROR2Q01974 943 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms