RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 TMCC2O75069 709 aa15.76■□□□□ 0.11
SHOX-204ENST00000554971 PTP4A3O75365 173 aa15.76■□□□□ 0.11
SHOX-204ENST00000554971 F10P00742 488 aa15.76■□□□□ 0.11
SHOX-204ENST00000554971 PSMD4P55036 377 aaKnown RBP15.76■□□□□ 0.11
SHOX-204ENST00000554971 TAS2R43P59537 309 aa15.76■□□□□ 0.11
SHOX-204ENST00000554971 PSG6Q00889 435 aa15.76■□□□□ 0.11
SHOX-204ENST00000554971 NNATQ16517 81 aa15.76■□□□□ 0.11
SHOX-204ENST00000554971 SLC29A4Q7RTT9 530 aa15.76■□□□□ 0.11
SHOX-204ENST00000554971 BEST3Q8N1M1 668 aa15.76■□□□□ 0.11
SHOX-204ENST00000554971 LSMEM1Q8N8F7 131 aa15.76■□□□□ 0.11
SHOX-204ENST00000554971 ATP6V1C2Q8NEY4 427 aa15.76■□□□□ 0.11
SHOX-204ENST00000554971 SPRYD4Q8WW59 207 aaPredicted RBP15.76■□□□□ 0.11
SHOX-204ENST00000554971 LMF1Q96S06 567 aa15.76■□□□□ 0.11
SHOX-204ENST00000554971 RASL10BQ96S79 203 aa15.76■□□□□ 0.11
SHOX-204ENST00000554971 FOLH1BQ9HBA9 442 aa15.76■□□□□ 0.11
SHOX-204ENST00000554971 KCNE5Q9UJ90 142 aa15.76■□□□□ 0.11
SHOX-204ENST00000554971 SLC19A2O60779 497 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 APOL3O95236 402 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 HLA-DQB1P01920 261 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 CLEC2LP0C7M8 214 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 CELP19835 753 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 MAKP20794 623 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 HTR3AP46098 478 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 MTNR1BP49286 362 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 POU4F2Q12837 409 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 MFAP5Q13361 173 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 LY6DQ14210 128 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 GALEQ14376 348 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 BAK1Q16611 211 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 RTL4Q6ZR62 310 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 NRARPQ7Z6K4 114 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 CMIPQ8IY22 773 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 OIT3Q8WWZ8 545 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 ZNF426Q9BUY5 554 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.75■□□□□ 0.11
SHOX-204ENST00000554971 ANKRD10Q9NXR5 420 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 PLA2G3Q9NZ20 509 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 STMN3Q9NZ72 180 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 SIGLEC7Q9Y286 467 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 PCDHGB7Q9Y5F8 929 aa15.75■□□□□ 0.11
SHOX-204ENST00000554971 A0A0B4J2E0 115 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 CENPVL1A0A0U1RR11 272 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 A0A1B0GX12 115 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 PRR23D1E9PI22 279 aaPredicted RBP15.74■□□□□ 0.11
SHOX-204ENST00000554971 GABRPO00591 440 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 WDPCPO95876 746 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 PRR23D2P0DMB1 279 aaPredicted RBP15.74■□□□□ 0.11
SHOX-204ENST00000554971 PRG2P13727 222 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 KCNJ8Q15842 424 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 PLBD1Q6P4A8 553 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 ZNF550Q7Z398 422 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 ZNF227Q86WZ6 799 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 C17orf47Q8NEP4 570 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 OR5L2Q8NGL0 311 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 NEIL3Q8TAT5 605 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 KCTD12Q96CX2 325 aaKnown RBP15.74■□□□□ 0.11
SHOX-204ENST00000554971 TRIM36Q9NQ86 728 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 ZNF71Q9NQZ8 489 aaPredicted RBP15.74■□□□□ 0.11
SHOX-204ENST00000554971 TUBD1Q9UJT1 453 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 LHX6Q9UPM6 363 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 YARS2Q9Y2Z4 477 aaKnown RBP15.74■□□□□ 0.11
SHOX-204ENST00000554971 ZNF462Q96JM2 2506 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 A0A1W2PQ09 198 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 RIIAD1A6NNX1 92 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 RGS9O75916 674 aaPredicted RBP15.74■□□□□ 0.11
SHOX-204ENST00000554971 NTN1O95631 604 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 LALBAP00709 142 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 KRT8P05787 483 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 RFX2P48378 723 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 NR0B1P51843 470 aaKnown RBP15.74■□□□□ 0.11
SHOX-204ENST00000554971 FXYD6P3P58550 94 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 ACTC1P68032 377 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 ACTA1P68133 377 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 ABHD17BQ5VST6 288 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 LYPD8Q6UX82 237 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 IGFL3Q6UXB1 125 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 WDR88Q6ZMY6 472 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 SHFQ7M4L6 423 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 BBS1Q8NFJ9 593 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 OR4N2Q8NGD1 307 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 PRODH2Q9UF12 536 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 TEKT2Q9UIF3 430 aa15.74■□□□□ 0.11
SHOX-204ENST00000554971 RNF13O43567 381 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 CCNKO75909 580 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 SLC2A10O95528 541 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 IFNGP01579 166 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 MT-ND5P03915 603 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 CSF3P09919 207 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 GKN3PP0CG01 181 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 PEPDP12955 493 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 HK1P19367 917 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 PPICP45877 212 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 EVX1P49640 407 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 ZNF141Q15928 474 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 SLC35F1Q5T1Q4 408 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 TPRA1Q86W33 373 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 OR51G2Q8NGK0 314 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 G6PC3Q9BUM1 346 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 ALG8Q9BVK2 526 aa15.73■□□□□ 0.11
SHOX-204ENST00000554971 IFT27Q9BW83 186 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms