RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 NIPAL3Q6P499 406 aa9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 KLHL24Q6TFL4 600 aa9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 H1FNTQ75WM6 255 aaPredicted RBP9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 CCDC80Q76M96 950 aa9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 LSRQ86X29 649 aaPredicted RBP9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 WDR31Q8NA23 367 aa9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 OR10A6Q8NH74 314 aa9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 ZNF417Q8TAU3 575 aa9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 MAGEE2Q8TD90 523 aaPredicted RBP9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 GTPBP3Q969Y2 492 aaKnown RBP9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 SLC25A36Q96CQ1 311 aa9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 TRMT61AQ96FX7 289 aaKnown RBP9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 SLC41A3Q96GZ6 507 aa9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 Q96MF0 132 aa9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 ZNF587Q96SQ5 575 aaPredicted RBP9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 TRAF4Q9BUZ4 470 aaPredicted RBP9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 PCDHAC1Q9H158 963 aa9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 NANOGQ9H9S0 305 aa9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 MED4Q9NPJ6 270 aa9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 SAR1AQ9NR31 198 aa9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 ZANQ9Y493 2812 aa9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 ALPK2Q86TB3 2170 aa9.12□□□□□ -0.95
PTCD2P1-201ENST00000554393 CSPG4Q6UVK1 2322 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 ARPC4-TTLL3A0A0A6YYG9 625 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 RPL36A-HNRNPH2H7BZ11 118 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 FXYD1O00168 92 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 CHP2O43745 196 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 SLC43A1O75387 559 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 ZNF432O94892 652 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 MT-ATP6P00846 226 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 VIMP08670 466 aaKnown RBP9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 GRPRP30550 384 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 CDH12P55289 794 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 SLC25A3Q00325 362 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 KLF10Q13118 480 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 VEZF1Q14119 521 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 C3orf36Q3SXR2 165 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 C9orf135Q5VTT2 229 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 AGAP6Q5VW22 663 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 ERICH5Q6P6B1 374 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 SLC22A25Q6T423 547 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 LINC00114Q6XXX2 140 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 CALHM3Q86XJ0 350 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 SMYD1Q8NB12 490 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 GPR32P1Q8NGA4 272 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 OR6T1Q8NGN1 323 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 OR1K1Q8NGR3 316 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 NEUROG1Q92886 237 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 LRRC58Q96CX6 371 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 MCHR1Q99705 422 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 ASPNQ9BXN1 380 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 FKRPQ9H9S5 495 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 MRPL39Q9NYK5 338 aaKnown RBP9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 SEC14L4Q9UDX3 406 aa9.11□□□□□ -0.95
PTCD2P1-201ENST00000554393 ARFGEF3Q5TH69 2177 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 HIVEP2P31629 2446 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 A0A1W2PR80 420 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 H7C1Q1 480 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 M0R1B8 84 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 M0R3H8 397 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 MRASO14807 208 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 TRAF3IP2O43734 574 aaPredicted RBP9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 CD8AP01732 235 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 BGLAPP02818 100 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 OPN1SWP03999 348 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 HEXAP06865 529 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 CD247P20963 164 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 CLDN17P56750 224 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 ROR2Q01974 943 aaKnown RBP9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 PUDPQ08623 228 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 C1DQ13901 141 aaKnown RBP9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 NPTX1Q15818 432 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 TBRG1Q3YBR2 411 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 MMEL1Q495T6 779 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 RABL3Q5HYI8 236 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 REP15Q6BDI9 236 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 HMBOX1Q6NT76 420 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 ZNF544Q6NX49 715 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 ANKRD16Q6P6B7 361 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 TMEM123Q8N131 208 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 KDM8Q8N371 416 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 FAM169BQ8N8A8 192 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 PCYOX1LQ8NBM8 494 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 PIK3C3Q8NEB9 887 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 TAMM41Q96BW9 452 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 MPP4Q96JB8 637 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 ALKBH3Q96Q83 286 aaPredicted RBP9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 DHRS9Q9BPW9 319 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 ECSITQ9BQ95 431 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 WFDC6Q9BQY6 131 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 ZNF426Q9BUY5 554 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 SLC19A3Q9BZV2 496 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 GSX1Q9H4S2 264 aaPredicted RBP9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 BARX1Q9HBU1 254 aaPredicted RBP9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 GID8Q9NWU2 228 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 NOX1Q9Y5S8 564 aa9.1□□□□□ -0.95
PTCD2P1-201ENST00000554393 CR1P17927 2039 aa9.09□□□□□ -0.95
PTCD2P1-201ENST00000554393 TRAPPC13A5PLN9 417 aa9.09□□□□□ -0.95
PTCD2P1-201ENST00000554393 TRIM64A6NGJ6 449 aa9.09□□□□□ -0.95
PTCD2P1-201ENST00000554393 TRIM64BA6NI03 449 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms