RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 SLC22A20A6NK97 555 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 RIIAD1A6NNX1 92 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 DLGAP1O14490 977 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 PRRG2O14669 202 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 SMAD9O15198 467 aaKnown RBP12.97□□□□□ -0.33
SHMT2-210ENST00000553950 CYTIPO60759 359 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 TP53P04637 393 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-210ENST00000553950 ZNF3P17036 446 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 PAICSP22234 425 aaKnown RBP12.97□□□□□ -0.33
SHMT2-210ENST00000553950 SDHAP31040 664 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 GGT2P36268 569 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 GIPRP48546 466 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 SLC16A1P53985 500 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 CTXN1P60606 82 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 CDK5Q00535 292 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 POU3F1Q03052 451 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-210ENST00000553950 C19orf57Q0VDD7 668 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 PON3Q15166 354 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 CLEC12AQ5QGZ9 265 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 ANKRD34AQ69YU3 496 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 OR2A2Q6IF42 318 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 P4HA3Q7Z4N8 544 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 GPAT4Q86UL3 456 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 C8orf59Q8N0T1 100 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-210ENST00000553950 TMEM99Q8N816 258 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 FAM57AQ8TBR7 257 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 FNDC8Q8TC99 324 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 TFAP2CQ92754 450 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 DNAJA3Q96EY1 480 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 ADAD1Q96M93 576 aaKnown RBP12.97□□□□□ -0.33
SHMT2-210ENST00000553950 UCN2Q96RP3 112 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 KATNB1Q9BVA0 655 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 ANKRD60Q9BZ19 345 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 PLA2G12AQ9BZM1 189 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 NRIP3Q9NQ35 241 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 ASF1BQ9NVP2 202 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 GRHPRQ9UBQ7 328 aa12.97□□□□□ -0.33
SHMT2-210ENST00000553950 NDRG4Q9ULP0 352 aaKnown RBP12.97□□□□□ -0.33
SHMT2-210ENST00000553950 CLCA1A8K7I4 914 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 CENPBD1B2RD01 187 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 C11orf98E9PRG8 122 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 BHLHE40O14503 412 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 XKRYO14609 159 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 PPP1R3DO95685 299 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 TXNDC12O95881 172 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 TPOP07202 933 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 P2RY4P51582 365 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 CASP6P55212 293 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 FXYD6P3P58550 94 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 ADARB1P78563 741 aaKnown RBP12.96□□□□□ -0.33
SHMT2-210ENST00000553950 HSF1Q00613 529 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 NFATC3Q12968 1075 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 FHL1Q13642 323 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 GINS1Q14691 196 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 C12orf73Q69YU5 71 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 PCSK4Q6UW60 755 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 JAZF1Q86VZ6 243 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 ST6GALNAC3Q8NDV1 305 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 OR8D4Q8NGM9 314 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 MOSPD2Q8NHP6 518 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 FAM81AQ8TBF8 368 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 CPT1CQ8TCG5 803 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 TRUB1Q8WWH5 349 aaKnown RBP12.96□□□□□ -0.33
SHMT2-210ENST00000553950 ZFP3Q96NJ6 502 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 SNX18Q96RF0 628 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 TUBA1CQ9BQE3 449 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 TP63Q9H3D4 680 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-210ENST00000553950 TXNIPQ9H3M7 391 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 FN3KQ9H479 309 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 RNF122Q9H9V4 155 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 CALHM2Q9HA72 323 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 TAS2R5Q9NYW4 299 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 CLCF1Q9UBD9 225 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 RCE1Q9Y256 329 aa12.96□□□□□ -0.33
SHMT2-210ENST00000553950 ZGRF1Q86YA3 2104 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 DOCK7Q96N67 2140 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 CACNA1BQ00975 2339 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 PIEZO2Q9H5I5 2752 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 COL6A6A6NMZ7 2263 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 PHF3Q92576 2039 aaKnown RBP12.95□□□□□ -0.34
SHMT2-210ENST00000553950 IGKV3D-15A0A087WSY6 115 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 CD8B2A6NJW9 211 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 E9PQ18 207 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 H0YC42 278 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 AHCYL1O43865 530 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 BCL10O95999 233 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 ACADSP16219 412 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 RPL27P61353 136 aaKnown RBP12.95□□□□□ -0.34
SHMT2-210ENST00000553950 MYBPC1Q00872 1141 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 TEKQ02763 1124 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 RASGEF1BQ0VAM2 473 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 KRR1Q13601 381 aaKnown RBP12.95□□□□□ -0.34
SHMT2-210ENST00000553950 SLC17A1Q14916 467 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 C3AR1Q16581 482 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 GXYLT1Q4G148 440 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 ACSF3Q4G176 576 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-210ENST00000553950 ZNF691Q5VV52 312 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 KRT80Q6KB66 452 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 THSD4Q6ZMP0 1018 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 ADGRE4PQ86SQ3 457 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms