RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 GPR137CQ8N3F9 429 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 ZG16BQ96DA0 208 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 TRIM44Q96DX7 344 aaPredicted RBP11.71□□□□□ -0.53
PRPF39-204ENST00000553605 ZNF75AQ96N20 296 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 PAFAH2Q99487 392 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 MRI1Q9BV20 369 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 TAPBPLQ9BX59 468 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 TNFRSF12AQ9NP84 129 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.71□□□□□ -0.53
PRPF39-204ENST00000553605 DECR2Q9NUI1 292 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 C1RLQ9NZP8 487 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 RASD1Q9Y272 281 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 UTP11Q9Y3A2 253 aaKnown RBP11.71□□□□□ -0.53
PRPF39-204ENST00000553605 WDR45Q9Y484 360 aa11.71□□□□□ -0.53
PRPF39-204ENST00000553605 ISPDA4D126 451 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 TRAPPC2LH3BP13 241 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 CFLARO15519 480 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 SLC43A1O75387 559 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 NDUFA7O95182 113 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 CLPTM1O96005 669 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 HPCAL1P37235 193 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 CLDN17P56750 224 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 RELBQ01201 579 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 PLAURQ03405 335 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 LIPMQ5VYY2 423 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 C9orf139Q6ZV77 190 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 HMGN2P46Q86SG4 172 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 OR2T11Q8NH01 316 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 SNX33Q8WV41 574 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 CNOT9Q92600 299 aaKnown RBP11.7□□□□□ -0.54
PRPF39-204ENST00000553605 KTI12Q96EK9 354 aaPredicted RBP11.7□□□□□ -0.54
PRPF39-204ENST00000553605 EXD2Q9NVH0 621 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 SEC14L4Q9UDX3 406 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 RCE1Q9Y256 329 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 INSIG2Q9Y5U4 225 aa11.7□□□□□ -0.54
PRPF39-204ENST00000553605 NUP214P35658 2090 aaPredicted RBP11.69□□□□□ -0.54
PRPF39-204ENST00000553605 IGHV3OR16-10A0A075B7F0 116 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 AGAP5A6NIR3 686 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 ZNF99A8MXY4 864 aaPredicted RBP11.69□□□□□ -0.54
PRPF39-204ENST00000553605 GUSBP08236 651 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 ZNF12P17014 697 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 CXCR1P25024 350 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 RPL3P39023 403 aaKnown RBP11.69□□□□□ -0.54
PRPF39-204ENST00000553605 PTDSS1P48651 473 aaKnown RBP11.69□□□□□ -0.54
PRPF39-204ENST00000553605 FAM189A2Q15884 450 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 KPRPQ5T749 579 aaPredicted RBP11.69□□□□□ -0.54
PRPF39-204ENST00000553605 CLEC6AQ6EIG7 209 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 RGS7BPQ6MZT1 257 aaPredicted RBP11.69□□□□□ -0.54
PRPF39-204ENST00000553605 FIP1L1Q6UN15 594 aaKnown RBP11.69□□□□□ -0.54
PRPF39-204ENST00000553605 C6orf120Q7Z4R8 191 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 KDM8Q8N371 416 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 NATD1Q8N6N6 113 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 OR52E2Q8NGJ4 325 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 CCL17Q92583 94 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 TSPAN32Q96QS1 320 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 POLE3Q9NRF9 147 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 TNFRSF19Q9NS68 423 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 NINJ2Q9NZG7 142 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 SLC7A8Q9UHI5 535 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 TMED5Q9Y3A6 229 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 RNF114Q9Y508 228 aa11.69□□□□□ -0.54
PRPF39-204ENST00000553605 MDFIC2A0A1B0GVS7 189 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 SLC22A23A1A5C7 686 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 POC1B-GALNT4F8VUJ3 575 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 IGHMP01871 453 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 IGHV4-38-2P0DP08 117 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 ZNF43P17038 809 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 LSP1P33241 339 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 SOAT1P35610 550 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 KLF3P57682 345 aaPredicted RBP11.68□□□□□ -0.54
PRPF39-204ENST00000553605 HBA1P69905 142 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 TSTQ16762 297 aaKnown RBP11.68□□□□□ -0.54
PRPF39-204ENST00000553605 GALNTL6Q49A17 601 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 PARP8Q8N3A8 854 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 SYNPRQ8TBG9 265 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 MRAPQ8TCY5 172 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 XAGE5Q8WWM1 108 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 SLC30A2Q9BRI3 323 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 FUT8Q9BYC5 575 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 RAB17Q9H0T7 212 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 SAP30LQ9HAJ7 183 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 TCF7L1Q9HCS4 588 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 ATAD3AQ9NVI7 634 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 SLCO1C1Q9NYB5 712 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 KLHL21Q9UJP4 597 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 ZNF180Q9UJW8 692 aa11.68□□□□□ -0.54
PRPF39-204ENST00000553605 POLR3KQ9Y2Y1 108 aaPredicted RBP11.68□□□□□ -0.54
PRPF39-204ENST00000553605 IGLV3-9A0A075B6K5 115 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 A8MVM7 634 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 SRRM5B3KS81 715 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 FAAHO00519 579 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 LSM1O15116 133 aaKnown RBP11.67□□□□□ -0.54
PRPF39-204ENST00000553605 RAB36O95755 333 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 SNRPAP09012 282 aaKnown RBP11.67□□□□□ -0.54
PRPF39-204ENST00000553605 OR12D1P0DN82 309 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 NEFHP12036 1026 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 UQCRBP14927 111 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 GIPRP48546 466 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 NAA20P61599 178 aa11.67□□□□□ -0.54
PRPF39-204ENST00000553605 RAB1AP62820 205 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms