RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 RP2O75695 350 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 GSNP06396 782 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 TFPTP0C1Z6 253 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 ZNF43P17038 809 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 CDKN2CP42773 168 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 RPS5P46782 204 aaKnown RBP7.79□□□□□ -1.16
SYNE2-209ENST00000553308 LIMS1P48059 325 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 EVX1P49640 407 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 PIGFQ07326 219 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 CHI3L2Q15782 390 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 SMU1Q2TAY7 513 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 LIN52Q52LA3 116 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 PDLIM3Q53GG5 364 aaPredicted RBP7.79□□□□□ -1.16
SYNE2-209ENST00000553308 TMEM123Q8N131 208 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 ANKK1Q8NFD2 765 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 IL17RDQ8NFM7 739 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 OR52P1PQ8NH57 321 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 MFSD8Q8NHS3 518 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 TCP10LQ8TDR4 215 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 TEX37Q96LM6 180 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 ZNF75AQ96N20 296 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 CCDC115Q96NT0 180 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 OR2M2Q96R28 347 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 JMJD8Q96S16 334 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 MS4A5Q9H3V2 200 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 B3GNT2Q9NY97 397 aa7.79□□□□□ -1.16
SYNE2-209ENST00000553308 DSPPQ9NZW4 1301 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 MGAM2Q2M2H8 2515 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 A0A096LPI6 279 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 CCDC154A6NI56 674 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 ZNF99A8MXY4 864 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-209ENST00000553308 M0R082 166 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 M0R3G1 203 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 TRAF3IP2O43734 574 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-209ENST00000553308 ITM2AO43736 263 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 BPGMP07738 259 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 NUDT17P0C025 328 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 NAT2P11245 290 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 CD79AP11912 226 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 ZNF35P13682 527 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 ZNF14P17017 642 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-209ENST00000553308 ADRA2CP18825 462 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 NCF2P19878 526 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-209ENST00000553308 GTF2E2P29084 291 aaKnown RBP7.78□□□□□ -1.16
SYNE2-209ENST00000553308 S100A3P33764 101 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 GLRXP35754 106 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 ANXA11P50995 505 aaKnown RBP7.78□□□□□ -1.16
SYNE2-209ENST00000553308 CLNS1AP54105 237 aaKnown RBP7.78□□□□□ -1.16
SYNE2-209ENST00000553308 NME5P56597 212 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 TMEM33P57088 247 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 COPZ1P61923 177 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 MYBPC1Q00872 1141 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 EGR4Q05215 589 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 C1DQ13901 141 aaKnown RBP7.78□□□□□ -1.16
SYNE2-209ENST00000553308 FXNQ16595 210 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 GSG1Q2KHT4 349 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 DPY19L1Q2PZI1 675 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 ALKBH6Q3KRA9 238 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 ZNF311Q5JNZ3 666 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 RPS26P11Q5JNZ5 115 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-209ENST00000553308 AVPI1Q5T686 147 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 CARD17Q5XLA6 110 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 C1QL2Q7Z5L3 287 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 SERPINA11Q86U17 422 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 CCDC36Q8IYA8 594 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 LRRC34Q8IZ02 419 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 CLIP4Q8N3C7 705 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 RIBC1Q8N443 379 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-209ENST00000553308 ZNF781Q8N8C0 355 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 ZDHHC22Q8N966 263 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 PIK3C3Q8NEB9 887 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 ZNF417Q8TAU3 575 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 STK35Q8TDR2 534 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 KTI12Q96EK9 354 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-209ENST00000553308 PKNOX2Q96KN3 472 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 OXGR1Q96P68 337 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 ZIM3Q96PE6 472 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 PANX1Q96RD7 426 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 ZNF587Q96SQ5 575 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-209ENST00000553308 SUCNR1Q9BXA5 334 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 TMPRSS13Q9BYE2 586 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 BTNL2Q9UIR0 455 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 ZNF443Q9Y2A4 671 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-209ENST00000553308 CHST2Q9Y4C5 530 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 NOX1Q9Y5S8 564 aa7.78□□□□□ -1.16
SYNE2-209ENST00000553308 A0A1W2PPW3 197 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 PLPP2O43688 288 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 CDC14BO60729 498 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 FZD7O75084 574 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 MPZL1O95297 269 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 BCHEP06276 602 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 B4GALT1P15291 398 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 CBLP22681 906 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 IL12AP29459 219 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 MAGEB1P43366 347 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 PTDSS1P48651 473 aaKnown RBP7.77□□□□□ -1.17
SYNE2-209ENST00000553308 UFM1P61960 85 aa7.77□□□□□ -1.17
SYNE2-209ENST00000553308 UBA52P62987 128 aaKnown RBP7.77□□□□□ -1.17
SYNE2-209ENST00000553308 MRPS11P82912 194 aaKnown RBP7.77□□□□□ -1.17
SYNE2-209ENST00000553308 TXNL4AP83876 142 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms