RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 EVX1P49640 407 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 RIN1Q13671 783 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 ZNF311Q5JNZ3 666 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 RPS26P11Q5JNZ5 115 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-221ENST00000550914 FAM69AQ5T7M9 428 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 NET1Q7Z628 596 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-221ENST00000550914 CROCCP2Q86T23 111 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 MYPOPQ86VE0 399 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-221ENST00000550914 GPR137CQ8N3F9 429 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 LSMEM1Q8N8F7 131 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 ADPRHL1Q8NDY3 354 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 UBASH3BQ8TF42 649 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 SLC38A4Q969I6 547 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 SLC25A36Q96CQ1 311 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 KTI12Q96EK9 354 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-221ENST00000550914 MAELQ96JY0 434 aaKnown RBP11.12□□□□□ -0.63
PTCH1-221ENST00000550914 SOX7Q9BT81 388 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 RAD21L1Q9H4I0 556 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 SEC61A2Q9H9S3 476 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 CRLF2Q9HC73 371 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 KCNK9Q9NPC2 374 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 A4GALTQ9NPC4 353 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 SDR39U1Q9NRG7 319 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-221ENST00000550914 USP22Q9UPT9 525 aa11.12□□□□□ -0.63
PTCH1-221ENST00000550914 WNK2Q9Y3S1 2297 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 LRP5LA4QPB2 252 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 ZNF99A8MXY4 864 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-221ENST00000550914 TCF21O43680 179 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 TRAF3IP2O43734 574 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-221ENST00000550914 APEX1P27695 318 aaKnown RBP11.11□□□□□ -0.63
PTCH1-221ENST00000550914 CDH15P55291 814 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 FADDQ13158 208 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 C1DQ13901 141 aaKnown RBP11.11□□□□□ -0.63
PTCH1-221ENST00000550914 DAG1Q14118 895 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 MFSD13AQ14CX5 517 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 CEACAM16Q2WEN9 425 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 HHATQ5VTY9 493 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 ATG16L1Q676U5 607 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 H1FNTQ75WM6 255 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-221ENST00000550914 ZNF627Q7L945 461 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 SPATA21Q7Z572 469 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 TMEM123Q8N131 208 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 KDM8Q8N371 416 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 SVOPLQ8N434 492 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 BBS10Q8TAM1 723 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 DNAJA4Q8WW22 397 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-221ENST00000550914 CKAP2Q8WWK9 683 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 LRR1Q96L50 414 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 OR2M2Q96R28 347 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 PAIP2Q9BPZ3 127 aaKnown RBP11.11□□□□□ -0.63
PTCH1-221ENST00000550914 DENND2DQ9H6A0 471 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-221ENST00000550914 NOX3Q9HBY0 568 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 DYNLRB1Q9NP97 96 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 RPS6KB2Q9UBS0 482 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 TMEFF2Q9UIK5 374 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-221ENST00000550914 CMAHPQ9Y471 501 aa11.11□□□□□ -0.63
PTCH1-221ENST00000550914 MGAM2Q2M2H8 2515 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 TRAV36DV7A0A075B6V5 113 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 M0R082 166 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 IGFBP1P08833 259 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-221ENST00000550914 ETS2P15036 469 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 IFNGR1P15260 489 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 NR4A1P22736 598 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 PRKAR1BP31321 381 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 POLR2JP52435 117 aaKnown RBP11.1□□□□□ -0.63
PTCH1-221ENST00000550914 DVL1P1P54792 670 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-221ENST00000550914 SRSF2Q01130 221 aaKnown RBP11.1□□□□□ -0.63
PTCH1-221ENST00000550914 NPRL3Q12980 569 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 SNTB2Q13425 540 aaKnown RBP11.1□□□□□ -0.63
PTCH1-221ENST00000550914 RGNQ15493 299 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 ADRM1Q16186 407 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 FAM91A1Q658Y4 838 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 NXNQ6DKJ4 435 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 MDP1Q86V88 176 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 C20orf196Q8IYI0 205 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 OR6S1Q8NH40 331 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 ZNF417Q8TAU3 575 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 GTF2H4Q92759 462 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 TAAR8Q969N4 342 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 VPS33AQ96AX1 596 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 ZNF837Q96EG3 531 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-221ENST00000550914 ZNF587Q96SQ5 575 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-221ENST00000550914 CENPHQ9H3R5 247 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 B3GNT2Q9NY97 397 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 CORINQ9Y5Q5 1042 aa11.1□□□□□ -0.63
PTCH1-221ENST00000550914 DYSFO75923 2080 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 A0A0A6YYJ9 748 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 ZNF503-AS2A6NEH8 195 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 SYNGR3O43761 229 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 ADRA2AP08913 450 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 GRPRP30550 384 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 IL2RGP31785 369 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 SRP14P37108 136 aaKnown RBP11.09□□□□□ -0.63
PTCH1-221ENST00000550914 WDR4P57081 412 aaKnown RBP11.09□□□□□ -0.63
PTCH1-221ENST00000550914 HOXC5Q00444 222 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 GTDC1Q4AE62 458 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 SLC9B1Q4ZJI4 515 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 C6orf10Q5SRN2 563 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 CEP85LQ5SZL2 805 aa11.09□□□□□ -0.63
PTCH1-221ENST00000550914 REP15Q6BDI9 236 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms