RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 DNAJA4Q8WW22 397 aaPredicted RBP20.01■□□□□ 0.79
SMARCD1-209ENST00000550477 CRLF2Q9HC73 371 aa20.01■□□□□ 0.79
SMARCD1-209ENST00000550477 GPR35Q9HC97 309 aa20.01■□□□□ 0.79
SMARCD1-209ENST00000550477 BCL2L10Q9HD36 194 aa20.01■□□□□ 0.79
SMARCD1-209ENST00000550477 B3GAT2Q9NPZ5 323 aa20.01■□□□□ 0.79
SMARCD1-209ENST00000550477 SH3PXD2BA1X283 911 aa20■□□□□ 0.79
SMARCD1-209ENST00000550477 UBDO15205 165 aa20■□□□□ 0.79
SMARCD1-209ENST00000550477 ZNF432O94892 652 aa20■□□□□ 0.79
SMARCD1-209ENST00000550477 THBS4P35443 961 aa20■□□□□ 0.79
SMARCD1-209ENST00000550477 SRP14P37108 136 aaKnown RBP20■□□□□ 0.79
SMARCD1-209ENST00000550477 DAG1Q14118 895 aa20■□□□□ 0.79
SMARCD1-209ENST00000550477 CEACAM16Q2WEN9 425 aa20■□□□□ 0.79
SMARCD1-209ENST00000550477 TNFAIP8L3Q5GJ75 292 aa20■□□□□ 0.79
SMARCD1-209ENST00000550477 H1FNTQ75WM6 255 aaPredicted RBP20■□□□□ 0.79
SMARCD1-209ENST00000550477 ZNF786Q8N393 782 aa20■□□□□ 0.79
SMARCD1-209ENST00000550477 RFLNBQ8N5W9 214 aa20■□□□□ 0.79
SMARCD1-209ENST00000550477 UBASH3BQ8TF42 649 aa20■□□□□ 0.79
SMARCD1-209ENST00000550477 KTI12Q96EK9 354 aaPredicted RBP20■□□□□ 0.79
SMARCD1-209ENST00000550477 DOK1Q99704 481 aa20■□□□□ 0.79
SMARCD1-209ENST00000550477 SPATA5L1Q9BVQ7 753 aa20■□□□□ 0.79
SMARCD1-209ENST00000550477 SLC6A13Q9NSD5 602 aa20■□□□□ 0.79
SMARCD1-209ENST00000550477 CMAHPQ9Y471 501 aa20■□□□□ 0.79
SMARCD1-209ENST00000550477 ZNF99A8MXY4 864 aaPredicted RBP19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 CLIC1O00299 241 aa19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 C8BP07358 591 aa19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 IFNGR1P15260 489 aa19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 APEX1P27695 318 aaKnown RBP19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 HGFACQ04756 655 aa19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 RGNQ15493 299 aa19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 ADRM1Q16186 407 aa19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 MIER2Q8N344 545 aa19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 SVOPLQ8N434 492 aa19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 LINC01356Q8N9X3 169 aa19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 CKAP2Q8WWK9 683 aa19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 MAELQ96JY0 434 aaKnown RBP19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 EPYCQ99645 322 aa19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 PTDSS2Q9BVG9 487 aa19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 NELFAQ9H3P2 528 aa19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 A4GALTQ9NPC4 353 aa19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 SDR39U1Q9NRG7 319 aaPredicted RBP19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 TMEFF2Q9UIK5 374 aaPredicted RBP19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 NOX1Q9Y5S8 564 aa19.99■□□□□ 0.79
SMARCD1-209ENST00000550477 TRAV36DV7A0A075B6V5 113 aa19.98■□□□□ 0.79
SMARCD1-209ENST00000550477 LOC102725191A0A1B0GVB3 256 aa19.98■□□□□ 0.79
SMARCD1-209ENST00000550477 SNNO75324 88 aaPredicted RBP19.98■□□□□ 0.79
SMARCD1-209ENST00000550477 TACSTD2P09758 323 aa19.98■□□□□ 0.79
SMARCD1-209ENST00000550477 ETS2P15036 469 aa19.98■□□□□ 0.79
SMARCD1-209ENST00000550477 NQO1P15559 274 aaKnown RBP19.98■□□□□ 0.79
SMARCD1-209ENST00000550477 NCALDP61601 193 aa19.98■□□□□ 0.79
SMARCD1-209ENST00000550477 EGR4Q05215 589 aa19.98■□□□□ 0.79
SMARCD1-209ENST00000550477 C6orf89Q6UWU4 347 aa19.98■□□□□ 0.79
SMARCD1-209ENST00000550477 KRT73Q86Y46 540 aa19.98■□□□□ 0.79
SMARCD1-209ENST00000550477 UEVLDQ8IX04 471 aa19.98■□□□□ 0.79
SMARCD1-209ENST00000550477 RNF217Q8TC41 542 aa19.98■□□□□ 0.79
SMARCD1-209ENST00000550477 PARD6BQ9BYG5 372 aa19.98■□□□□ 0.79
SMARCD1-209ENST00000550477 NKIRAS1Q9NYS0 192 aa19.98■□□□□ 0.79
SMARCD1-209ENST00000550477 CORINQ9Y5Q5 1042 aa19.98■□□□□ 0.79
SMARCD1-209ENST00000550477 IGHV2OR16-5A0A0B4J2B6 119 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 LRP5LA4QPB2 252 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 M0R082 166 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 TCF21O43680 179 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 PRKAR1BP31321 381 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 STX1BP61266 288 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 HOXC5Q00444 222 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 POU3F1Q03052 451 aaPredicted RBP19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 SNTB2Q13425 540 aaKnown RBP19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 ALG10BQ5I7T1 473 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 REP15Q6BDI9 236 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 ULK3Q6PHR2 472 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 MDP1Q86V88 176 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 GOLGA6L1Q8N7Z2 621 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 LSMEM1Q8N8F7 131 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 ZNF417Q8TAU3 575 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 ZNF587Q96SQ5 575 aaPredicted RBP19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 ASPNQ9BXN1 380 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 MS4A5Q9H3V2 200 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 SLC13A4Q9UKG4 626 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 CHST2Q9Y4C5 530 aa19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 V9GYY5 206 aaPredicted RBP19.97■□□□□ 0.79
SMARCD1-209ENST00000550477 TMEM120BA0PK00 339 aa19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 M0R3G1 203 aa19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 CELA3BP08861 270 aa19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 GRPRP30550 384 aa19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 EVX1P49640 407 aa19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 TRMT5Q32P41 509 aaKnown RBP19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 GTDC1Q4AE62 458 aa19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 LSRQ86X29 649 aaPredicted RBP19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 ADPRHL1Q8NDY3 354 aa19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 BHLHE22Q8NFJ8 381 aaPredicted RBP19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 MGARPQ8TDB4 240 aa19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 TAAR8Q969N4 342 aa19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 VPS33AQ96AX1 596 aa19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 SLC47A1Q96FL8 570 aa19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 LRR1Q96L50 414 aa19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 DENND2DQ9H6A0 471 aaPredicted RBP19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 SEC61A2Q9H9S3 476 aa19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 TMEM27Q9HBJ8 222 aa19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 B3GAT1Q9P2W7 334 aa19.96■□□□□ 0.79
SMARCD1-209ENST00000550477 POFUT2Q9Y2G5 429 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms