RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 ZNF23P17027 643 aa12.25□□□□□ -0.45
DDX11-228ENST00000545115 HNF1AP20823 631 aa12.25□□□□□ -0.45
DDX11-228ENST00000545115 ARR3P36575 388 aa12.25□□□□□ -0.45
DDX11-228ENST00000545115 SLC18A1P54219 525 aa12.25□□□□□ -0.45
DDX11-228ENST00000545115 ARF1P84077 181 aaKnown RBP12.25□□□□□ -0.45
DDX11-228ENST00000545115 C1DQ13901 141 aaKnown RBP12.25□□□□□ -0.45
DDX11-228ENST00000545115 FAM120AOSQ5T036 256 aa12.25□□□□□ -0.45
DDX11-228ENST00000545115 MIER2Q8N344 545 aa12.25□□□□□ -0.45
DDX11-228ENST00000545115 LSMEM1Q8N8F7 131 aa12.25□□□□□ -0.45
DDX11-228ENST00000545115 PIK3C3Q8NEB9 887 aa12.25□□□□□ -0.45
DDX11-228ENST00000545115 GTF2H4Q92759 462 aa12.25□□□□□ -0.45
DDX11-228ENST00000545115 SLC38A4Q969I6 547 aa12.25□□□□□ -0.45
DDX11-228ENST00000545115 OR52B2Q96RD2 323 aa12.25□□□□□ -0.45
DDX11-228ENST00000545115 PAIP1Q9H074 479 aaKnown RBP12.25□□□□□ -0.45
DDX11-228ENST00000545115 IGHV2OR16-5A0A0B4J2B6 119 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 hCG_2039718K7EN88 272 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 M0R082 166 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 CELA3BP08861 270 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 NPR2P20594 1047 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 PRKAR1BP31321 381 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 HGFACQ04756 655 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 NPRL3Q12980 569 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 CEACAM16Q2WEN9 425 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 SLC2A7Q6PXP3 512 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 IL17RELQ6ZVW7 336 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 NET1Q7Z628 596 aaPredicted RBP12.24□□□□□ -0.45
DDX11-228ENST00000545115 MYPOPQ86VE0 399 aaPredicted RBP12.24□□□□□ -0.45
DDX11-228ENST00000545115 CCDC36Q8IYA8 594 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 ZNF417Q8TAU3 575 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 ANKRD27Q96NW4 1050 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 ZNF587Q96SQ5 575 aaPredicted RBP12.24□□□□□ -0.45
DDX11-228ENST00000545115 CRLF2Q9HC73 371 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 GPR35Q9HC97 309 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 NKIRAS1Q9NYS0 192 aa12.24□□□□□ -0.45
DDX11-228ENST00000545115 LOC102725191A0A1B0GVB3 256 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 A0A1B0GWA3 101 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 ZNF99A8MXY4 864 aaPredicted RBP12.23□□□□□ -0.45
DDX11-228ENST00000545115 STAMBPO95630 424 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 TGFAP01135 160 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 HOXB9P17482 250 aaPredicted RBP12.23□□□□□ -0.45
DDX11-228ENST00000545115 GIFP27352 417 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 HTR2AP28223 471 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 GRPRP30550 384 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 THBS4P35443 961 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 CAPZA2P47755 286 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 IL1RL1Q01638 556 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 ALG10BQ5I7T1 473 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 H1FNTQ75WM6 255 aaPredicted RBP12.23□□□□□ -0.45
DDX11-228ENST00000545115 SPATA21Q7Z572 469 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 MDP1Q86V88 176 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 TMEM123Q8N131 208 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 SVOPLQ8N434 492 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 GOLGA6L1Q8N7Z2 621 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 ADPRHL1Q8NDY3 354 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 DNAJA4Q8WW22 397 aaPredicted RBP12.23□□□□□ -0.45
DDX11-228ENST00000545115 NEU4Q8WWR8 484 aaPredicted RBP12.23□□□□□ -0.45
DDX11-228ENST00000545115 TAAR8Q969N4 342 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 ZNF837Q96EG3 531 aaPredicted RBP12.23□□□□□ -0.45
DDX11-228ENST00000545115 OR2M2Q96R28 347 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 USP22Q9UPT9 525 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 SVEP1Q4LDE5 3571 aa12.23□□□□□ -0.45
DDX11-228ENST00000545115 IGKV1D-42A0A075B6H8 117 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 TRAV36DV7A0A075B6V5 113 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 ZNF503-AS2A6NEH8 195 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 TRAF3IP2O43734 574 aaPredicted RBP12.22□□□□□ -0.45
DDX11-228ENST00000545115 ARAFP10398 606 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 DAOP14920 347 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 MRPL19P49406 292 aaKnown RBP12.22□□□□□ -0.45
DDX11-228ENST00000545115 STX1BP61266 288 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 MAGOHP61326 146 aaKnown RBP12.22□□□□□ -0.45
DDX11-228ENST00000545115 NCALDP61601 193 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 SNTB2Q13425 540 aaKnown RBP12.22□□□□□ -0.45
DDX11-228ENST00000545115 SQLEQ14534 574 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 MFSD13AQ14CX5 517 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 FAM91A1Q658Y4 838 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 ULK3Q6PHR2 472 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 DHRS4L2Q6PKH6 230 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 UEVLDQ8IX04 471 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 IL17RDQ8NFM7 739 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 NFKBIDQ8NI38 313 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 DOK1Q99704 481 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 SOX7Q9BT81 388 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 SPATA5L1Q9BVQ7 753 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 C19orf24Q9BVV8 132 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 NOX3Q9HBY0 568 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 DYNLRB1Q9NP97 96 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 KLHL14Q9P2G3 628 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 TESQ9UGI8 421 aaKnown RBP12.22□□□□□ -0.45
DDX11-228ENST00000545115 CORINQ9Y5Q5 1042 aa12.22□□□□□ -0.45
DDX11-228ENST00000545115 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.22□□□□□ -0.457e-7■■■■■ 34.2
DDX11-228ENST00000545115 LRP5LA4QPB2 252 aa12.21□□□□□ -0.45
DDX11-228ENST00000545115 M0R3G1 203 aa12.21□□□□□ -0.45
DDX11-228ENST00000545115 SEC14L2O76054 403 aa12.21□□□□□ -0.45
DDX11-228ENST00000545115 TACSTD2P09758 323 aa12.21□□□□□ -0.45
DDX11-228ENST00000545115 NQO1P15559 274 aaKnown RBP12.21□□□□□ -0.45
DDX11-228ENST00000545115 CBLP22681 906 aa12.21□□□□□ -0.45
DDX11-228ENST00000545115 CHN2P52757 468 aa12.21□□□□□ -0.45
DDX11-228ENST00000545115 DAG1Q14118 895 aa12.21□□□□□ -0.45
DDX11-228ENST00000545115 ADRM1Q16186 407 aa12.21□□□□□ -0.45
DDX11-228ENST00000545115 CR1LQ2VPA4 569 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms