RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 KLHL13Q9P2N7 655 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 CDH10Q9Y6N8 788 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 C11orf98E9PRG8 122 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 RAMP1O60894 148 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 HPRP00739 348 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 IL2RAP01589 272 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 ALPLP05186 524 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 OSMP13725 252 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 IGFBP5P24593 272 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 RPL4P36578 427 aaKnown RBP20.6■□□□□ 0.89
HOMER3-205ENST00000542541 LRRC36Q1X8D7 754 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 EIF2S3LQ2VIR3 472 aaKnown RBP20.6■□□□□ 0.89
HOMER3-205ENST00000542541 RFX4Q33E94 735 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 LPCAT4Q643R3 524 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 PLXDC2Q6UX71 529 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 MOSPD2Q8NHP6 518 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 GMPPAQ96IJ6 420 aaPredicted RBP20.6■□□□□ 0.89
HOMER3-205ENST00000542541 ZFP3Q96NJ6 502 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 OR52D1Q9H346 318 aa20.6■□□□□ 0.89
HOMER3-205ENST00000542541 IGKV3D-15A0A087WSY6 115 aa20.59■□□□□ 0.89
HOMER3-205ENST00000542541 ZNF716A6NP11 495 aa20.59■□□□□ 0.89
HOMER3-205ENST00000542541 SOCS2O14508 198 aa20.59■□□□□ 0.89
HOMER3-205ENST00000542541 CDH2P19022 906 aaPredicted RBP20.59■□□□□ 0.89
HOMER3-205ENST00000542541 PEX2P28328 305 aa20.59■□□□□ 0.89
HOMER3-205ENST00000542541 RAD23AP54725 363 aa20.59■□□□□ 0.89
HOMER3-205ENST00000542541 PER3P56645 1201 aa20.59■□□□□ 0.89
HOMER3-205ENST00000542541 OGFRL1Q5TC84 451 aaPredicted RBP20.59■□□□□ 0.89
HOMER3-205ENST00000542541 ANKRD34AQ69YU3 496 aa20.59■□□□□ 0.89
HOMER3-205ENST00000542541 PACRGLQ8N7B6 248 aa20.59■□□□□ 0.89
HOMER3-205ENST00000542541 OR9K2Q8NGE7 335 aa20.59■□□□□ 0.89
HOMER3-205ENST00000542541 OR52L1Q8NGH7 329 aa20.59■□□□□ 0.89
HOMER3-205ENST00000542541 SLC29A1Q99808 456 aa20.59■□□□□ 0.89
HOMER3-205ENST00000542541 VCXQ9H320 206 aa20.59■□□□□ 0.89
HOMER3-205ENST00000542541 BCO1Q9HAY6 547 aa20.59■□□□□ 0.89
HOMER3-205ENST00000542541 B3GAT1Q9P2W7 334 aa20.59■□□□□ 0.89
HOMER3-205ENST00000542541 REV1Q9UBZ9 1251 aa20.59■□□□□ 0.89
HOMER3-205ENST00000542541 POLEQ07864 2286 aa20.58■□□□□ 0.89
HOMER3-205ENST00000542541 A0A1W2PRG6 482 aa20.58■□□□□ 0.89
HOMER3-205ENST00000542541 ZNF724A8MTY0 619 aa20.58■□□□□ 0.89
HOMER3-205ENST00000542541 KDM4EB2RXH2 506 aaPredicted RBP20.58■□□□□ 0.89
HOMER3-205ENST00000542541 H3BN98 237 aa20.58■□□□□ 0.89
HOMER3-205ENST00000542541 YES1P07947 543 aa20.58■□□□□ 0.89
HOMER3-205ENST00000542541 GLI4P10075 376 aa20.58■□□□□ 0.89
HOMER3-205ENST00000542541 GNLYP22749 145 aa20.58■□□□□ 0.89
HOMER3-205ENST00000542541 SLC6A6P31641 620 aa20.58■□□□□ 0.89
HOMER3-205ENST00000542541 C9orf106Q8NAJ2 232 aa20.58■□□□□ 0.89
HOMER3-205ENST00000542541 VCX3BQ9H321 246 aa20.58■□□□□ 0.89
HOMER3-205ENST00000542541 TMEFF2Q9UIK5 374 aaPredicted RBP20.58■□□□□ 0.89
HOMER3-205ENST00000542541 MEMO1Q9Y316 297 aa20.58■□□□□ 0.89
HOMER3-205ENST00000542541 A0A1B0GUH1 482 aa20.57■□□□□ 0.88
HOMER3-205ENST00000542541 F13BP05160 661 aa20.57■□□□□ 0.88
HOMER3-205ENST00000542541 CRHP06850 196 aa20.57■□□□□ 0.88
HOMER3-205ENST00000542541 ESRRGP62508 458 aa20.57■□□□□ 0.88
HOMER3-205ENST00000542541 POU3F1Q03052 451 aaPredicted RBP20.57■□□□□ 0.88
HOMER3-205ENST00000542541 PMPCAQ10713 525 aa20.57■□□□□ 0.88
HOMER3-205ENST00000542541 SLC36A3Q495N2 470 aa20.57■□□□□ 0.88
HOMER3-205ENST00000542541 TMEM201Q5SNT2 666 aa20.57■□□□□ 0.88
HOMER3-205ENST00000542541 DPY19L2P2Q6ZN68 376 aa20.57■□□□□ 0.88
HOMER3-205ENST00000542541 SEM1Q6ZVN7 128 aa20.57■□□□□ 0.88
HOMER3-205ENST00000542541 CREB3L2Q70SY1 520 aa20.57■□□□□ 0.88
HOMER3-205ENST00000542541 KIF18BQ86Y91 864 aa20.57■□□□□ 0.88
HOMER3-205ENST00000542541 TEX47Q8TBZ9 253 aa20.57■□□□□ 0.88
HOMER3-205ENST00000542541 EGLN3Q9H6Z9 239 aa20.57■□□□□ 0.88
HOMER3-205ENST00000542541 CCL21O00585 134 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 SERPINI2O75830 405 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 SOX14O95416 240 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 FXYD6P3P58550 94 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 CTXN1P60606 82 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 RIPPLY2Q5TAB7 128 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 GALNT5Q7Z7M9 940 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 RPRMLQ8N4K4 120 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 LRRC75AQ8NAA5 344 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 PRR7Q8TB68 274 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 SAMD8Q96LT4 415 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 GPX7Q96SL4 187 aaPredicted RBP20.56■□□□□ 0.88
HOMER3-205ENST00000542541 TBC1D23Q9NUY8 699 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 EMC9Q9Y3B6 208 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 FLVCR1Q9Y5Y0 555 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 NPIPB13A6NJU9 1138 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 NPIPB4C9JG80 1138 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 AKAP8O43823 692 aaKnown RBP20.56■□□□□ 0.88
HOMER3-205ENST00000542541 SS18L1O75177 396 aaPredicted RBP20.56■□□□□ 0.88
HOMER3-205ENST00000542541 CD14P08571 375 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 ZNF26P17031 533 aaPredicted RBP20.56■□□□□ 0.88
HOMER3-205ENST00000542541 POU1F1P28069 291 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 CEACAM8P31997 349 aaPredicted RBP20.56■□□□□ 0.88
HOMER3-205ENST00000542541 DAP3P51398 398 aaKnown RBP20.56■□□□□ 0.88
HOMER3-205ENST00000542541 EEF1A1P5Q5VTE0 462 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 SLC35D2Q76EJ3 337 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 TUSC5Q8IXB3 177 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 GALNT4Q8N4A0 578 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 INTS12Q96CB8 462 aaKnown RBP20.56■□□□□ 0.88
HOMER3-205ENST00000542541 DMRTA2Q96SC8 542 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 IFT27Q9BW83 186 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 TSSK6Q9BXA6 273 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 RASSF4Q9H2L5 321 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 PARPBPQ9NWS1 579 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 IL20RAQ9UHF4 553 aa20.56■□□□□ 0.88
HOMER3-205ENST00000542541 ING1Q9UK53 422 aaPredicted RBP20.56■□□□□ 0.88
HOMER3-205ENST00000542541 HSPB2A8KAH6 182 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms