RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ZNF304Q9HCX3 659 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 B3GAT2Q9NPZ5 323 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 C12orf4Q9NQ89 552 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 HPF1Q9NWY4 346 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 FBXL2Q9UKC9 423 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 A3GALT2U3KPV4 340 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 CHD5Q8TDI0 1954 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 VSTM2BA6NLU5 285 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 ANXA7P20073 488 aaKnown RBP14.79□□□□□ -0.04
VARS2-212ENST00000542001 GRK1Q15835 563 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 WBP2NLQ6ICG8 309 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 RAB12Q6IQ22 244 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 OR52I2Q8NH67 350 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 CCDC107Q8WV48 283 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 FOXQ1Q9C009 403 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 DUSP22Q9NRW4 184 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 FGF21Q9NSA1 209 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 PARPBPQ9NWS1 579 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 ANKRD10Q9NXR5 420 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 DOCK8Q8NF50 2099 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 TEX13DA0A0J9YY54 714 aaPredicted RBP14.79□□□□□ -0.04
VARS2-212ENST00000542001 TMEM269A0A1B0GVZ9 245 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 PRAMEF27A3QJZ7 478 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 M0QYG6 137 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 RFPL3O75679 317 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 CSTBP04080 98 aaKnown RBP14.79□□□□□ -0.04
VARS2-212ENST00000542001 CAMK2DQ13557 499 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 FXNQ16595 210 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 TMEM92Q6UXU6 159 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 PLCZ1Q86YW0 608 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 IQCF2Q8IXL9 164 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 RNF113BQ8IZP6 322 aaKnown RBP14.79□□□□□ -0.04
VARS2-212ENST00000542001 BRIX1Q8TDN6 353 aaKnown RBP14.79□□□□□ -0.04
VARS2-212ENST00000542001 CMC2Q9NRP2 79 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 SLC17A4Q9Y2C5 497 aa14.79□□□□□ -0.04
VARS2-212ENST00000542001 HCRTR1O43613 425 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 HTR3BO95264 441 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 OR2T7P0C7T2 308 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 CFL1P23528 166 aaKnown RBP14.78□□□□□ -0.04
VARS2-212ENST00000542001 SLC22A6Q4U2R8 563 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 GALNT6Q8NCL4 622 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 OR2T27Q8NH04 317 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 THAP6Q8TBB0 222 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 HOXD1Q9GZZ0 328 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 NT5DC2Q9H857 520 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 HTRA4P83105 476 aaPredicted RBP14.78□□□□□ -0.04
VARS2-212ENST00000542001 GALEQ14376 348 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 COX15Q7KZN9 410 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 KLK11Q9UBX7 282 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 EMC9Q9Y3B6 208 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 SYT7O43581 403 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 TNFRSF4P43489 277 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 RPL22L1Q6P5R6 122 aaKnown RBP14.78□□□□□ -0.04
VARS2-212ENST00000542001 OR13C9Q8NGT0 318 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 BAHD1Q8TBE0 780 aaPredicted RBP14.78□□□□□ -0.04
VARS2-212ENST00000542001 C8orf33Q9H7E9 229 aaPredicted RBP14.78□□□□□ -0.04
VARS2-212ENST00000542001 TREM1Q9NP99 234 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 SLC22A13Q9Y226 551 aa14.78□□□□□ -0.04
VARS2-212ENST00000542001 IGKV1-8A0A0C4DH67 115 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 CTNSO60931 367 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 KNG1P01042 644 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 INHBBP09529 407 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 SRMP19623 302 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 CXADRP78310 365 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 CDK10Q15131 360 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 KIAA0895LQ68EN5 471 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 COMMD7Q86VX2 200 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 C8orf44Q96CB5 159 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 COX14Q96I36 57 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 BMFQ96LC9 184 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 DDOQ99489 341 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 MED17Q9NVC6 651 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 C2orf42Q9NWW7 574 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 PRH1P02810 166 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 CD14P08571 375 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 PNMTP11086 282 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 MTNR1BP49286 362 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 ARHGDIBP52566 201 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 EMP2P54851 167 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 DUSP8Q13202 625 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 CA13Q8N1Q1 262 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 CST11Q9H112 138 aa14.77□□□□□ -0.04
VARS2-212ENST00000542001 TSPAN11A1L157 253 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 LILRB5O75023 590 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 RP2O75695 350 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 DCNP07585 359 aaKnown RBP14.77□□□□□ -0.05
VARS2-212ENST00000542001 SWI5Q1ZZU3 235 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 AWAT2Q6E213 333 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 BATF2Q8N1L9 274 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 TEX19Q8NA77 164 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 OR5T2Q8NGG2 359 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 PGAM5Q96HS1 289 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 POTEKPQ9BYX7 375 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 SEMA6CQ9H3T2 930 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 PTGES2Q9H7Z7 377 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 TAS2R3Q9NYW6 316 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 SBF1O95248 1867 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 PLRG1O43660 514 aaKnown RBP14.77□□□□□ -0.05
VARS2-212ENST00000542001 CDK5Q00535 292 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 GLO1Q04760 184 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms