RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 SLC38A2Q96QD8 506 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 RHNO1Q9BSD3 238 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 TMEM43Q9BTV4 400 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 KATNB1Q9BVA0 655 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 ASPNQ9BXN1 380 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 KAT8Q9H7Z6 458 aaKnown RBP12.93□□□□□ -0.34
DDX11-217ENST00000540935 SEC14L4Q9UDX3 406 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 PMF1-BGLAPU3KQ54 211 aa12.93□□□□□ -0.34
DDX11-217ENST00000540935 HIVEP2P31629 2446 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 ATP6V1G2-DDX39BF2Z307 99 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 SSX4O60224 188 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 NDUFS7O75251 213 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 CRYAAP02489 173 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 TP53P04637 393 aaPredicted RBP12.92□□□□□ -0.34
DDX11-217ENST00000540935 NQO1P15559 274 aaKnown RBP12.92□□□□□ -0.34
DDX11-217ENST00000540935 PTNP21246 168 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 PCSK6P29122 969 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 MTPNP58546 118 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 IL1RL1Q01638 556 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 LGALS3BPQ08380 585 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 RETREG3Q86VR2 466 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 UEVLDQ8IX04 471 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 CCDC36Q8IYA8 594 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 SMYD1Q8NB12 490 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 RASSF5Q8WWW0 418 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 SH3GL1Q99961 368 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 PRR14Q9BWN1 585 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 CRNNQ9UBG3 495 aaPredicted RBP12.92□□□□□ -0.34
DDX11-217ENST00000540935 MOKQ9UQ07 419 aa12.92□□□□□ -0.34
DDX11-217ENST00000540935 NSD1Q96L73 2696 aaPredicted RBP12.92□□□□□ -0.34
DDX11-217ENST00000540935 FN1P02751 2386 aaKnown RBP12.91□□□□□ -0.34
DDX11-217ENST00000540935 IGHV1-18A0A0C4DH31 117 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 INAFM1C9JVW0 142 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 M0QX08 132 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 TRAF3IP2O43734 574 aaPredicted RBP12.91□□□□□ -0.34
DDX11-217ENST00000540935 CHP2O43745 196 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 TPST2O60704 377 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 MT-ATP6P00846 226 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 PCGF2P35227 344 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 CDH12P55289 794 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 PMS2P3Q13401 168 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 CYLC2Q14093 348 aaPredicted RBP12.91□□□□□ -0.34
DDX11-217ENST00000540935 DUSP7Q16829 419 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 CLEC2AQ6UVW9 174 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 LINGO2Q7L985 606 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 SLC26A7Q8TE54 656 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 LRR1Q96L50 414 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 OR2M2Q96R28 347 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 MCHR1Q99705 422 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 ARHGDIGQ99819 225 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 GPR35Q9HC97 309 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 MRPL39Q9NYK5 338 aaKnown RBP12.91□□□□□ -0.34
DDX11-217ENST00000540935 NOX1Q9Y5S8 564 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 CSPG4Q6UVK1 2322 aa12.91□□□□□ -0.34
DDX11-217ENST00000540935 A0A096LPE4 126 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 A0A1W2PPZ6 126 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 ZNF99A8MXY4 864 aaPredicted RBP12.9□□□□□ -0.34
DDX11-217ENST00000540935 MS4A18H0YCH9 400 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 PDE5AO76074 875 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 NPPAP01160 153 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 IGKV3-15P01624 115 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 IGLV1-44P01699 117 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 BGLAPP02818 100 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 CSF3P09919 207 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 TROVE2P10155 538 aaKnown RBP eCLIP12.9□□□□□ -0.34
DDX11-217ENST00000540935 CBLP22681 906 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 ARF1P84077 181 aaKnown RBP12.9□□□□□ -0.34
DDX11-217ENST00000540935 PUDPQ08623 228 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 SELPLGQ14242 412 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 CEACAM16Q2WEN9 425 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 TRMT5Q32P41 509 aaKnown RBP12.9□□□□□ -0.34
DDX11-217ENST00000540935 MS4A18Q3C1V0 323 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 COQ5Q5HYK3 327 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 PXKQ7Z7A4 578 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 SNX32Q86XE0 403 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 TMEM123Q8N131 208 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 C10orf53Q8N6V4 93 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 OR10H5Q8NGA6 315 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 OR4F15Q8NGB8 312 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 OR10A6Q8NH74 314 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 NELFAQ9H3P2 528 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 CRLF2Q9HC73 371 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 B3GAT2Q9NPZ5 323 aa12.9□□□□□ -0.34
DDX11-217ENST00000540935 FBXO9Q9UK97 447 aaPredicted RBP12.9□□□□□ -0.34
DDX11-217ENST00000540935 ABCA2Q9BZC7 2435 aa12.89□□□□□ -0.35
DDX11-217ENST00000540935 VSTM5A8MXK1 200 aa12.89□□□□□ -0.35
DDX11-217ENST00000540935 M0R3H8 397 aa12.89□□□□□ -0.35
DDX11-217ENST00000540935 TLX2O43763 284 aaPredicted RBP12.89□□□□□ -0.35
DDX11-217ENST00000540935 SASH3O75995 380 aa12.89□□□□□ -0.35
DDX11-217ENST00000540935 OPN1SWP03999 348 aa12.89□□□□□ -0.35
DDX11-217ENST00000540935 CBR1P16152 277 aa12.89□□□□□ -0.35
DDX11-217ENST00000540935 SLC25A16P16260 332 aa12.89□□□□□ -0.35
DDX11-217ENST00000540935 ARR3P36575 388 aa12.89□□□□□ -0.35
DDX11-217ENST00000540935 EFNA4P52798 201 aa12.89□□□□□ -0.35
DDX11-217ENST00000540935 SNRPD2P62316 118 aaKnown RBP12.89□□□□□ -0.35
DDX11-217ENST00000540935 NAAAQ02083 359 aa12.89□□□□□ -0.35
DDX11-217ENST00000540935 POU3F1Q03052 451 aaPredicted RBP12.89□□□□□ -0.35
DDX11-217ENST00000540935 KRTAP1-1Q07627 177 aa12.89□□□□□ -0.35
DDX11-217ENST00000540935 ENTPD8Q5MY95 495 aa12.89□□□□□ -0.35
DDX11-217ENST00000540935 LINC00114Q6XXX2 140 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms