RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ALKBH3Q96Q83 286 aaPredicted RBP14.84□□□□□ -0.03
CD9-209ENST00000540891 LINC00470Q9BZP3 86 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 FKRPQ9H9S5 495 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 C20orf141Q9NUB4 165 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 CD300AQ9UGN4 299 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 SLC25A15Q9Y619 301 aa14.84□□□□□ -0.03
CD9-209ENST00000540891 ANKRD17O75179 2603 aaKnown RBP14.84□□□□□ -0.03
CD9-209ENST00000540891 MYO9AB2RTY4 2548 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 A0A1W2PR80 420 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 DPRXA6NFQ7 191 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 ENO4A6NNW6 628 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 MT-ND1P03886 318 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 RAF1P04049 648 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 ASAH2BP0C7U1 165 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 RBM34P42696 430 aaKnown RBP14.83□□□□□ -0.04
CD9-209ENST00000540891 NR1H2P55055 460 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 LSM11P83369 360 aaKnown RBP eCLIP14.83□□□□□ -0.04
CD9-209ENST00000540891 POU3F1Q03052 451 aaPredicted RBP14.83□□□□□ -0.04
CD9-209ENST00000540891 PUDPQ08623 228 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 C1DQ13901 141 aaKnown RBP14.83□□□□□ -0.04
CD9-209ENST00000540891 IFI44LQ53G44 452 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 ZNF704Q6ZNC4 412 aaPredicted RBP14.83□□□□□ -0.04
CD9-209ENST00000540891 UEVLDQ8IX04 471 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 TMEM123Q8N131 208 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 CCDC197Q8NCU1 140 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 C1orf162Q8NEQ5 155 aaPredicted RBP14.83□□□□□ -0.04
CD9-209ENST00000540891 OR52N5Q8NH56 324 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 TMEM239Q8WW34 195 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 GEMIN6Q8WXD5 167 aaKnown RBP14.83□□□□□ -0.04
CD9-209ENST00000540891 TXNDC15Q96J42 360 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 OR2M2Q96R28 347 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 MAN2C1Q9NTJ4 1040 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 TAS2R5Q9NYW4 299 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 ZNF229Q9UJW7 825 aa14.83□□□□□ -0.04
CD9-209ENST00000540891 RAI1Q7Z5J4 1906 aaPredicted RBP14.83□□□□□ -0.04
CD9-209ENST00000540891 CCDC168Q8NDH2 2452 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 OR6C65A6NJZ3 312 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 PRSS23O95084 383 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 IGF2P01344 180 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 IFNW1P05000 195 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 HSD17B1P14061 328 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 CD53P19397 219 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 TCN1P20061 433 aaPredicted RBP14.82□□□□□ -0.04
CD9-209ENST00000540891 DNASE1P24855 282 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 IL1RL1Q01638 556 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 FOXD4Q12950 439 aaPredicted RBP14.82□□□□□ -0.04
CD9-209ENST00000540891 PHYHD1Q5SRE7 291 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 OR7E24Q6IFN5 339 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 PXKQ7Z7A4 578 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 LURAP1LQ8IV03 231 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 DEFB107AQ8IZN7 70 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 OFCC1Q8IZS5 231 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 FAM86B1Q8N7N1 296 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 LILRB1Q8NHL6 650 aaPredicted RBP14.82□□□□□ -0.04
CD9-209ENST00000540891 MBD6Q96DN6 1003 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 MUCL1Q96DR8 90 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 BOD1Q96IK1 185 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 CDRT15Q96T59 188 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 EMC6Q9BV81 110 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 NANSQ9NR45 359 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 SLC17A5Q9NRA2 495 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 DCAF13Q9NV06 445 aaKnown RBP14.82□□□□□ -0.04
CD9-209ENST00000540891 MED29Q9NX70 200 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 RHCGQ9UBD6 479 aa14.82□□□□□ -0.04
CD9-209ENST00000540891 SLC35F4A4IF30 521 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 ZNF587BE7ETH6 402 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 RPL36A-HNRNPH2H7BZ11 118 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 PIP5K1CO60331 668 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 ADORA3P0DMS8 318 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 AHCYP23526 432 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 MSX2P35548 267 aaPredicted RBP14.81□□□□□ -0.04
CD9-209ENST00000540891 ART1P52961 327 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 BSPH1Q075Z2 132 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 ST3GAL3Q11203 375 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 ZP4Q12836 540 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 KEAP1Q14145 624 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 ACKR1Q16570 336 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 SAMD4BQ5PRF9 694 aaKnown RBP14.81□□□□□ -0.04
CD9-209ENST00000540891 FKBP9P1Q75LS8 142 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 ABHD12BQ7Z5M8 362 aaPredicted RBP14.81□□□□□ -0.04
CD9-209ENST00000540891 C17orf78Q8N4C9 275 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 OR1K1Q8NGR3 316 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 ZNF837Q96EG3 531 aaPredicted RBP14.81□□□□□ -0.04
CD9-209ENST00000540891 NSL1Q96IY1 281 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 NELFAQ9H3P2 528 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 GORASP2Q9H8Y8 452 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 UBTD1Q9HAC8 227 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 NGBQ9NPG2 151 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 NOX1Q9Y5S8 564 aa14.81□□□□□ -0.04
CD9-209ENST00000540891 C11orf98E9PRG8 122 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 SLC43A1O75387 559 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 SERPINI2O75830 405 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 KRT33AO76009 404 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 OR7A10O76100 309 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 T-ENOLP0DO92 83 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 CDH2P19022 906 aaPredicted RBP14.8□□□□□ -0.04
CD9-209ENST00000540891 FUT1P19526 365 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 ROR2Q01974 943 aaKnown RBP14.8□□□□□ -0.04
CD9-209ENST00000540891 TGFBR3Q03167 851 aa14.8□□□□□ -0.04
CD9-209ENST00000540891 HIKESHIQ53FT3 197 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms