RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 SF3B5Q9BWJ5 86 aaKnown RBP8.7□□□□□ -1.02
CLIP1-214ENST00000540539 TAS2R10Q9NYW0 307 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 RHCGQ9UBD6 479 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 KCND3Q9UK17 655 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 RNF24Q9Y225 148 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 KPTNQ9Y664 436 aa8.7□□□□□ -1.02
CLIP1-214ENST00000540539 YLPM1P49750 1951 aaKnown RBP8.7□□□□□ -1.02
CLIP1-214ENST00000540539 CBY3A6NI87 242 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 OR10H3O60404 316 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 PQBP1O60828 265 aaKnown RBP8.69□□□□□ -1.02
CLIP1-214ENST00000540539 RGS9O75916 674 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-214ENST00000540539 CYB5R3P00387 301 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-214ENST00000540539 MBPP02686 304 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-214ENST00000540539 PCCBP05166 539 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 SNRPBP14678 240 aaKnown RBP8.69□□□□□ -1.02
CLIP1-214ENST00000540539 ADRA1AP35348 466 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 SLC37A1P57057 533 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 TMEM115Q12893 351 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-214ENST00000540539 TSPAN31Q12999 210 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 OR7A5Q15622 319 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 IFI44LQ53G44 452 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 OLFML2AQ68BL7 652 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 PAQR3Q6TCH7 311 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 SLC36A4Q6YBV0 504 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 SLC24A5Q71RS6 500 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 DCXRQ7Z4W1 244 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 FAM129CQ86XR2 697 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 WFDC12Q8WWY7 111 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 TNFRSF14Q92956 283 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 OTUB2Q96DC9 234 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 IGSF21Q96ID5 467 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 ADGRG7Q96K78 797 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 ADAD1Q96M93 576 aaKnown RBP8.69□□□□□ -1.02
CLIP1-214ENST00000540539 ZNF426Q9BUY5 554 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 DERL2Q9GZP9 239 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 FZD8Q9H461 694 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 PLEKHA1Q9HB21 404 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 PTGFRNQ9P2B2 879 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 SIX4Q9UIU6 781 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 EXOSC1Q9Y3B2 195 aaKnown RBP8.69□□□□□ -1.02
CLIP1-214ENST00000540539 FLVCR1Q9Y5Y0 555 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 FAM171A2A8MVW0 826 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 H7C4K7 107 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 PGRMC2O15173 223 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 B4GALT5O43286 388 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 FAM157CP0CG43 387 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 LPOP22079 712 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-214ENST00000540539 TTPAP49638 278 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 HMGA2P52926 109 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 CRYBB1P53674 252 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-214ENST00000540539 PCBP4P57723 403 aaKnown RBP8.69□□□□□ -1.02
CLIP1-214ENST00000540539 BTG2P78543 158 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 RAB40BQ12829 278 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 GTF2H2Q13888 395 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 RPE65Q16518 533 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 ZNF791Q3KP31 576 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-214ENST00000540539 LY6G6FQ5SQ64 297 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 LEMD1Q68G75 181 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 GTF2H2CQ6P1K8 395 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 KCTD9Q7L273 389 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 NUP54Q7Z3B4 507 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 GCNT2Q8N0V5 402 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 OR5AP2Q8NGF4 316 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 FIBINQ8TAL6 211 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 M1APQ8TC57 530 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 THAP3Q8WTV1 239 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-214ENST00000540539 TMEM40Q8WWA1 233 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 RGP1Q92546 391 aaPredicted RBP8.69□□□□□ -1.02
CLIP1-214ENST00000540539 SMIM8Q96KF7 97 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 WRAP53Q9BUR4 548 aaKnown RBP8.69□□□□□ -1.02
CLIP1-214ENST00000540539 ADGRE3Q9BY15 652 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 ASB8Q9H765 288 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 LMAN1LQ9HAT1 526 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 CHST11Q9NPF2 352 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 GPR173Q9NS66 373 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 KLK11Q9UBX7 282 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 GNG8Q9UK08 70 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 HDGFL3Q9Y3E1 203 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 ZNF337Q9Y3M9 751 aa8.69□□□□□ -1.02
CLIP1-214ENST00000540539 ARRDC5A6NEK1 342 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 OR5H14A6NHG9 310 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 TSPAN3O60637 253 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 GGCTO75223 188 aaKnown RBP8.68□□□□□ -1.02
CLIP1-214ENST00000540539 RPP40O75818 363 aaKnown RBP8.68□□□□□ -1.02
CLIP1-214ENST00000540539 ERCC1P07992 297 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-214ENST00000540539 ACP2P11117 423 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 IRF2P14316 349 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 ST6GAL1P15907 406 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 SELEP16581 610 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 EN2P19622 333 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-214ENST00000540539 TYMPP19971 482 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 TBPP20226 339 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 CD82P27701 267 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 HTR2CP28335 458 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 XCR1P46094 333 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 NKX6-1P78426 367 aaPredicted RBP8.68□□□□□ -1.02
CLIP1-214ENST00000540539 CACNG1Q06432 222 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 RAB35Q15286 201 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 GGNBP1Q5YKI7 109 aa8.68□□□□□ -1.02
CLIP1-214ENST00000540539 ABLIM2Q6H8Q1 611 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms