RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 ITCHQ96J02 903 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 SEC61A2Q9H9S3 476 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 GPR35Q9HC97 309 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 THAP1Q9NVV9 213 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 ZIM2Q9NZV7 527 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 B3GAT1Q9P2W7 334 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 USP22Q9UPT9 525 aa10.39□□□□□ -0.75
CBX3P4-202ENST00000540428 ZNF99A8MXY4 864 aaPredicted RBP10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 BMP2P12643 396 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 PCMT1P22061 227 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 APEX1P27695 318 aaKnown RBP10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 EVX1P49640 407 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 DVL1P1P54792 670 aaPredicted RBP10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 CDH15P55291 814 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 FADDQ13158 208 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 RIN1Q13671 783 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 C1DQ13901 141 aaKnown RBP10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 DAG1Q14118 895 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 ADRM1Q16186 407 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 CEACAM16Q2WEN9 425 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 CROCCP2Q86T23 111 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 MYPOPQ86VE0 399 aaPredicted RBP10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 LSMEM1Q8N8F7 131 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 ADPRHL1Q8NDY3 354 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 BBS10Q8TAM1 723 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 UBASH3BQ8TF42 649 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 CKAP2Q8WWK9 683 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 SLC38A4Q969I6 547 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 KTI12Q96EK9 354 aaPredicted RBP10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 MAELQ96JY0 434 aaKnown RBP10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 RAD21L1Q9H4I0 556 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 CRLF2Q9HC73 371 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 DYNLRB1Q9NP97 96 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 KCNK9Q9NPC2 374 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 A4GALTQ9NPC4 353 aa10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 SDR39U1Q9NRG7 319 aaPredicted RBP10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 TMEFF2Q9UIK5 374 aaPredicted RBP10.38□□□□□ -0.75
CBX3P4-202ENST00000540428 ANK2Q01484 3957 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 M0R082 166 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 TRAF3IP2O43734 574 aaPredicted RBP10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 SNNO75324 88 aaPredicted RBP10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 IGFBP1P08833 259 aaPredicted RBP10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 ETS2P15036 469 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 IFNGR1P15260 489 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 NR4A1P22736 598 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 PRKAR1BP31321 381 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 SRP14P37108 136 aaKnown RBP10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 NPRL3Q12980 569 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 SNTB2Q13425 540 aaKnown RBP10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 MFSD13AQ14CX5 517 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 RGNQ15493 299 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 GTDC1Q4AE62 458 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 HHATQ5VTY9 493 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 H1FNTQ75WM6 255 aaPredicted RBP10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 ZNF627Q7L945 461 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 MDP1Q86V88 176 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 TMEM123Q8N131 208 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 OR6S1Q8NH40 331 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 ZNF417Q8TAU3 575 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 DNAJA4Q8WW22 397 aaPredicted RBP10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 VPS33AQ96AX1 596 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 LRR1Q96L50 414 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 OR2M2Q96R28 347 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 ZNF587Q96SQ5 575 aaPredicted RBP10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 PAIP2Q9BPZ3 127 aaKnown RBP10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 NOX3Q9HBY0 568 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 RPS6KB2Q9UBS0 482 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 CMAHPQ9Y471 501 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 SPEF1Q9Y4P9 236 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 CORINQ9Y5Q5 1042 aa10.37□□□□□ -0.75
CBX3P4-202ENST00000540428 TRAV36DV7A0A075B6V5 113 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 ZNF503-AS2A6NEH8 195 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 SYNGR3O43761 229 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 GRPRP30550 384 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 IL2RGP31785 369 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 HOXC5Q00444 222 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 SLC9B1Q4ZJI4 515 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 ALG10BQ5I7T1 473 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 C6orf10Q5SRN2 563 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 CEP85LQ5SZL2 805 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 FAM91A1Q658Y4 838 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 NXNQ6DKJ4 435 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 MEX3DQ86XN8 651 aaKnown RBP10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 UEVLDQ8IX04 471 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 C20orf196Q8IYI0 205 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 CDK20Q8IZL9 346 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 ZCCHC24Q8N2G6 241 aaKnown RBP10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 TAAR8Q969N4 342 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 MRPL24Q96A35 216 aaKnown RBP10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 ZNF837Q96EG3 531 aaPredicted RBP10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 SLC41A3Q96GZ6 507 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 SNX18Q96RF0 628 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 CENPHQ9H3R5 247 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 MS4A5Q9H3V2 200 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 DENND2DQ9H6A0 471 aaPredicted RBP10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 B3GNT2Q9NY97 397 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 SEC14L4Q9UDX3 406 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 NBEAL1Q6ZS30 2694 aa10.36□□□□□ -0.75
CBX3P4-202ENST00000540428 IGKV1D-42A0A075B6H8 117 aa10.35□□□□□ -0.75
CBX3P4-202ENST00000540428 A0A0A6YYJ9 748 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms