RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ZNF407Q9C0G0 2248 aa16.89■□□□□ 0.29
TNFRSF1A-213ENST00000540022 A0A1W2PNV4 684 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ZAR1LA6NP61 321 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 CLCA1A8K7I4 914 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 KDM4EB2RXH2 506 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 BHLHE40O14503 412 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 TPOP07202 933 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 HLA-DOBP13765 273 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SLC6A6P31641 620 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 RPL4P36578 427 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 GIPRP48546 466 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 CTXN1P60606 82 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 CDK5Q00535 292 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 GINS1Q14691 196 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 TAF11Q15544 211 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ACSM5Q6NUN0 579 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 FCRLAQ7L513 359 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 DHRSXQ8N5I4 330 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 OR52L1Q8NGH7 329 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 OR4Q3Q8NH05 313 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 FNDC9Q8TBE3 224 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 GPX7Q96SL4 187 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 INIPQ9NRY2 104 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 MCTS1Q9ULC4 181 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 RASD1Q9Y272 281 aa16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 USP9XQ93008 2570 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SERPINI2O75830 405 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 AQP8O94778 261 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SYNGR4O95473 234 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 PLGP00747 810 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 EDN3P14138 238 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ABOP16442 354 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ADARB1P78563 741 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 C6orf52Q5T4I8 152 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ABLIM2Q6H8Q1 611 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ZNF585AQ6P3V2 769 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 DPY19L2P2Q6ZN68 376 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 GPAT4Q86UL3 456 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SLC43A2Q8N370 569 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 FAM57AQ8TBR7 257 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 CYGBQ8WWM9 190 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 OXGR1Q96P68 337 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ZNF184Q99676 751 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 KATNB1Q9BVA0 655 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 IFT27Q9BW83 186 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 NRIP3Q9NQ35 241 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ADAM18Q9Y3Q7 739 aa16.87■□□□□ 0.29
TNFRSF1A-213ENST00000540022 LOC100130705A0A1B0GUX0 176 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 LOC102725191A0A1B0GVB3 256 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 AHRRA9YTQ3 701 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SLC16A6O15403 523 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 VAMP5O95183 116 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 PPP1R3DO95685 299 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 TGM6O95932 706 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 CD14P08571 375 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ERVK-25P63136 954 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SLC17A1Q14916 467 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SLX4IPQ5VYV7 408 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SLC27A4Q6P1M0 643 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 NHLRC1Q6VVB1 395 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 PXKQ7Z7A4 578 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 CD163Q86VB7 1156 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 OR2T33Q8NG76 320 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 RNF128Q8TEB7 428 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ABHD3Q8WU67 409 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 TFAP2CQ92754 450 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 HRASLS5Q96KN8 279 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SLC25A19Q9HC21 320 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 CLCF1Q9UBD9 225 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 NDRG4Q9ULP0 352 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ZNF175Q9Y473 711 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 HECTD1Q9ULT8 2610 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 MPDZO75970 2070 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ZNF716A6NP11 495 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 CYTIPO60759 359 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 CLIC3O95833 236 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 CAPGP40121 348 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 HSPA13P48723 471 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 POU3F1Q03052 451 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 PGGHGQ32M88 737 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ACSF3Q4G176 576 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 LNX2Q8N448 690 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ZNF555Q8NEP9 628 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ANKK1Q8NFD2 765 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ERMAPQ96PL5 475 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 TRIB1Q96RU8 372 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 PITX2Q99697 317 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 POLDIP3Q9BY77 421 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 PRRG4Q9BZD6 226 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 NDEL1Q9GZM8 345 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ING1Q9UK53 422 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ZNF835Q9Y2P0 537 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 IER3IP1Q9Y5U9 82 aa16.86■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SLC22A20A6NK97 555 aa16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 TRAF3IP2O43734 574 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SLC19A2O60779 497 aa16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 SMSP52788 366 aa16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 RASGEF1BQ0VAM2 473 aa16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 POU4F3Q15319 338 aa16.85■□□□□ 0.29
TNFRSF1A-213ENST00000540022 ACKR1Q16570 336 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms