RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 TIMP4Q99727 224 aa9.79□□□□□ -0.84
CLIP1-210ENST00000538120 MESP1Q9BRJ9 268 aa9.79□□□□□ -0.84
CLIP1-210ENST00000538120 MARVELD1Q9BSK0 173 aa9.79□□□□□ -0.84
CLIP1-210ENST00000538120 RNF32Q9H0A6 362 aa9.79□□□□□ -0.84
CLIP1-210ENST00000538120 SUSD2Q9UGT4 822 aa9.79□□□□□ -0.84
CLIP1-210ENST00000538120 GSTK1Q9Y2Q3 226 aa9.79□□□□□ -0.84
CLIP1-210ENST00000538120 UNC13CQ8NB66 2214 aa9.79□□□□□ -0.84
CLIP1-210ENST00000538120 SPEGQ15772 3267 aa9.79□□□□□ -0.84
CLIP1-210ENST00000538120 NUP210LQ5VU65 1888 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 CACNA1EQ15878 2313 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 IGHV5-10-1A0A0J9YXX1 117 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 A0A1W2PQ72 361 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 TO15178 435 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 ARHGEF9O43307 516 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 TSPAN2O60636 221 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 NOS3P29474 1203 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 FGF9P31371 208 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-210ENST00000538120 GPR143P51810 404 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 METTL11BQ5VVY1 283 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 PEAR1Q5VY43 1037 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-210ENST00000538120 ZNF57Q68EA5 555 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-210ENST00000538120 TIGD3Q6B0B8 471 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 VASNQ6EMK4 673 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 POMZP3Q6PJE2 187 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 CD200R1LQ6Q8B3 271 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 RTL4Q6ZR62 310 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 GID4Q8IVV7 300 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 FAM109AQ8N4B1 249 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 OR4M2Q8NGB6 313 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 OR1N1Q8NGS0 311 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 NEIL3Q8TAT5 605 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 PHOSPHO1Q8TCT1 267 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 DNAJA4Q8WW22 397 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-210ENST00000538120 EDAQ92838 391 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 DAZLQ92904 295 aaKnown RBP9.78□□□□□ -0.84
CLIP1-210ENST00000538120 SGTBQ96EQ0 304 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 MAP6Q96JE9 813 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 GAL3ST4Q96RP7 486 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 KCNJ15Q99712 375 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 WWTR1Q9GZV5 400 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 EXOSC3Q9NQT5 275 aaKnown RBP9.78□□□□□ -0.84
CLIP1-210ENST00000538120 H2AFY2Q9P0M6 372 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-210ENST00000538120 TEKT2Q9UIF3 430 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 IGLV3-12A0A075B6K2 115 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 C17orf51A8MQB3 221 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 GABRPO00591 440 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 SCDO00767 359 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 ICOSLGO75144 302 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 TFPIP10646 304 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 ELK1P19419 428 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 SLC2A5P22732 501 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 DCAF7P61962 342 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 CRMP1Q14194 572 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 IL20RBQ6UXL0 311 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 ASB18Q6ZVZ8 466 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 TRILQ7L0X0 811 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 RABEPKQ7Z6M1 372 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 ATG4DQ86TL0 474 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-210ENST00000538120 TIGD4Q8IY51 512 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 EID2Q8N6I1 236 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 ZNF527Q8NB42 609 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 NAXEQ8NCW5 288 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 OR4D9Q8NGE8 314 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 OR51G2Q8NGK0 314 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 OR5M3Q8NGP4 307 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 STT3BQ8TCJ2 826 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 OR6C1Q96RD1 312 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 SECISBP2Q96T21 854 aaKnown RBP9.78□□□□□ -0.84
CLIP1-210ENST00000538120 GAREM1Q9H706 876 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 NIPAL2Q9H841 368 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 ING3Q9NXR8 418 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 TNFRSF10DQ9UBN6 386 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 FBXL4Q9UKA2 621 aa9.78□□□□□ -0.84
CLIP1-210ENST00000538120 FER1L5A0AVI2 2057 aa9.77□□□□□ -0.84
CLIP1-210ENST00000538120 IGHV3-20A0A0C4DH32 117 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 TRDV1A0A1B0GX56 115 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 FAM86C2PA6NEL3 165 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 PATE3B3GLJ2 98 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 INMT-MINDY4F8WBC2 141 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 LAMTOR5O43504 91 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 AKAP8O43823 692 aaKnown RBP9.77□□□□□ -0.85
CLIP1-210ENST00000538120 REM1O75628 298 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 CLUP10909 449 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 PEPDP12955 493 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 SLC6A6P31641 620 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 NR0B1P51843 470 aaKnown RBP9.77□□□□□ -0.85
CLIP1-210ENST00000538120 ACY1Q03154 408 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 TM4SF20Q53R12 229 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 FAM205BPQ63HN1 556 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 SLC6A19Q695T7 634 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 WBP2NLQ6ICG8 309 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 PWWP2BQ6NUJ5 590 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 TMEM99Q8N816 258 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 C7orf57Q8NEG2 295 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 TEAD3Q99594 435 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 NUDT16L1Q9BRJ7 211 aaKnown RBP9.77□□□□□ -0.85
CLIP1-210ENST00000538120 CHRNA9Q9UGM1 479 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 SRPK3Q9UPE1 567 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 BAIAP2Q9UQB8 552 aa9.77□□□□□ -0.85
CLIP1-210ENST00000538120 LEUTXA8MZ59 168 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms