RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 FAM220AQ7Z4H9 259 aa11.12□□□□□ -0.63
CPSF7-218ENST00000537641 DND1Q8IYX4 353 aaKnown RBP11.12□□□□□ -0.63
CPSF7-218ENST00000537641 ZNF433Q8N7K0 673 aaPredicted RBP11.12□□□□□ -0.63
CPSF7-218ENST00000537641 CAMKVQ8NCB2 501 aa11.12□□□□□ -0.63
CPSF7-218ENST00000537641 NPEPL1Q8NDH3 523 aa11.12□□□□□ -0.63
CPSF7-218ENST00000537641 LCN9Q8WX39 176 aa11.12□□□□□ -0.63
CPSF7-218ENST00000537641 RGP1Q92546 391 aaPredicted RBP11.12□□□□□ -0.63
CPSF7-218ENST00000537641 FGF14Q92915 247 aa11.12□□□□□ -0.63
CPSF7-218ENST00000537641 SCARF2Q96GP6 870 aaPredicted RBP11.12□□□□□ -0.63
CPSF7-218ENST00000537641 FBRSQ9HAH7 460 aa11.12□□□□□ -0.63
CPSF7-218ENST00000537641 TCF7L1Q9HCS4 588 aa11.12□□□□□ -0.63
CPSF7-218ENST00000537641 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.12□□□□□ -0.63
CPSF7-218ENST00000537641 C5orf42Q9H799 3197 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 TRBV5-5A0A0J9YX44 114 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 SLC22A23A1A5C7 686 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 P2RX6O15547 441 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 TNFSF14O43557 240 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 ZNF432O94892 652 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 GPR75O95800 540 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 EGFP01133 1207 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 TACSTD2P09758 323 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 EMDP50402 254 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 SEC13P55735 322 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 GMFBP60983 142 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 MAT1AQ00266 395 aaKnown RBP11.11□□□□□ -0.63
CPSF7-218ENST00000537641 MGAT2Q10469 447 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 BTN1A1Q13410 526 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 KIR2DS3Q14952 304 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 SHHQ15465 462 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 TUSC1Q2TAM9 212 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 DEFB134Q4QY38 66 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 FBXO42Q6P3S6 717 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 ULK3Q6PHR2 472 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 GSG1LQ6UXU4 331 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 STAC2Q6ZMT1 411 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 DGLUCYQ7Z3D6 616 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 ZNF227Q86WZ6 799 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 SERPINA12Q8IW75 414 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 GLB1L2Q8IW92 636 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 CDH26Q8IXH8 852 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 PDZD9Q8IXQ8 264 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 OR2AK2Q8NG84 335 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 OR14C36Q8NHC7 312 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 COQ8AQ8NI60 647 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 RSC1A1Q92681 617 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 PTCHD1Q96NR3 888 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 OR2A5Q96R48 311 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 GPX7Q96SL4 187 aaPredicted RBP11.11□□□□□ -0.63
CPSF7-218ENST00000537641 GINS4Q9BRT9 223 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 PELOQ9BRX2 385 aaKnown RBP11.11□□□□□ -0.63
CPSF7-218ENST00000537641 APOOQ9BUR5 198 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 PBX4Q9BYU1 374 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 B3GNT4Q9C0J1 378 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 TWSG1Q9GZX9 223 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 IL21RQ9HBE5 538 aa11.11□□□□□ -0.63
CPSF7-218ENST00000537641 ATP6V1G2-DDX39BF2Z307 99 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 H7C417 338 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 PYCARD-AS1I3L0S3 204 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 ARPC5O15511 151 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 LINC01565O15544 149 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 FGF17O60258 216 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 RBBP9O75884 186 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 LPLP06858 475 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 VSIG10L2P0DP72 767 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 NTSR1P30989 418 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 TPMTP51580 245 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 SLC25A1P53007 311 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 ADPRHP54922 357 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 NANOS3P60323 173 aaKnown RBP11.1□□□□□ -0.63
CPSF7-218ENST00000537641 SNRPNP63162 240 aaKnown RBP11.1□□□□□ -0.63
CPSF7-218ENST00000537641 NHLRC1Q6VVB1 395 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 KRT77Q7Z794 578 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 LRRTM1Q86UE6 522 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 C7orf57Q8NEG2 295 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 OR52H1Q8NGJ2 320 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 OR51L1Q8NGJ5 315 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 CTHRC1Q96CG8 243 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 CCNL2Q96S94 520 aaPredicted RBP11.1□□□□□ -0.63
CPSF7-218ENST00000537641 GABRG3Q99928 467 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 LMF2Q9BU23 707 aaKnown RBP11.1□□□□□ -0.63
CPSF7-218ENST00000537641 MTFP1Q9UDX5 166 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 SLC6A5Q9Y345 797 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 ZNF337Q9Y3M9 751 aa11.1□□□□□ -0.63
CPSF7-218ENST00000537641 ARPC4-TTLL3A0A0A6YYG9 625 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 HSPB2A8KAH6 182 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 XRCC3O43542 346 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 ZFPL1O95159 310 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 ZNF35P13682 527 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 RPA2P15927 270 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 POU3F2P20265 443 aaPredicted RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 CFPP27918 469 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 RPL4P36578 427 aaKnown RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 PSMD4P55036 377 aaKnown RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 CLDN12P56749 244 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 KIAA1024LP59773 190 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 ID2Q02363 134 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 SSBP1Q04837 148 aaKnown RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 ALKBH1Q13686 389 aaKnown RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 EXOSC7Q15024 291 aaKnown RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 HSPB2Q16082 182 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms