RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ARPC5O15511 151 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 OR10H2O60403 315 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 FZD7O75084 574 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 IFNGP01579 166 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 ZNF3P17036 446 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 KCNJ3P48549 501 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 ACTC1P68032 377 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 ACTA1P68133 377 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 SNTB2Q13425 540 aaKnown RBP16.44■□□□□ 0.22
RAB40C-203ENST00000535977 EXOSC7Q15024 291 aaKnown RBP16.44■□□□□ 0.22
RAB40C-203ENST00000535977 SLC16A13Q7RTY0 426 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 PRSS41Q7RTY9 318 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 NAXDQ8IW45 347 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 SLITRK4Q8IW52 837 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 BPIFCQ8NFQ6 507 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 OR1M1Q8NGA1 313 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 OR5M9Q8NGP3 310 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 ARL6Q9H0F7 186 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 PIAS3Q9Y6X2 628 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 REV3LO60673 3130 aa16.44■□□□□ 0.22
RAB40C-203ENST00000535977 PLPP2O43688 288 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 PVRP15151 417 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 PPP3CBP16298 524 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 VEGFCP49767 419 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 SFRP4Q6FHJ7 346 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-203ENST00000535977 MAMSTRQ6ZN01 415 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 TMEFF1Q8IYR6 380 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 OR5W2Q8NH69 310 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 C2CD4CQ8TF44 421 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 CMSS1Q9BQ75 279 aaKnown RBP16.43■□□□□ 0.22
RAB40C-203ENST00000535977 IER2Q9BTL4 223 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 ISG20L2Q9H9L3 353 aaKnown RBP16.43■□□□□ 0.22
RAB40C-203ENST00000535977 GXYLT2A0PJZ3 443 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 SEMA4FO95754 770 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 CT62P0C5K7 136 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 SLC6A6P31641 620 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 OR10A3P58181 314 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 SEC61A1P61619 476 aaKnown RBP16.43■□□□□ 0.22
RAB40C-203ENST00000535977 ZNF550Q7Z398 422 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 RELL2Q8NC24 303 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-203ENST00000535977 OR52R1Q8NGF1 315 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 OR5T3Q8NGG3 340 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 OR51Q1Q8NH59 317 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 KISS1RQ969F8 398 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-203ENST00000535977 LCORQ96JN0 433 aaPredicted RBP16.43■□□□□ 0.22
RAB40C-203ENST00000535977 ZNF426Q9BUY5 554 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 SEMA6CQ9H3T2 930 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 SLC22A11Q9NSA0 550 aa16.43■□□□□ 0.22
RAB40C-203ENST00000535977 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.42■□□□□ 0.22
RAB40C-203ENST00000535977 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.42■□□□□ 0.22
RAB40C-203ENST00000535977 GIPP09681 153 aaPredicted RBP16.42■□□□□ 0.22
RAB40C-203ENST00000535977 MST1P26927 711 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 CCR5P51681 352 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 PSMD4P55036 377 aaKnown RBP16.42■□□□□ 0.22
RAB40C-203ENST00000535977 ZNF660Q6AZW8 331 aaPredicted RBP16.42■□□□□ 0.22
RAB40C-203ENST00000535977 ARHGAP11AQ6P4F7 1023 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 GSG1LQ6UXU4 331 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 OR11G2Q8NGC1 345 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 OR13C2Q8NGS9 318 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 TRMT10AQ8TBZ6 339 aaKnown RBP16.42■□□□□ 0.22
RAB40C-203ENST00000535977 THAP4Q8WY91 577 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 TMPRSS13Q9BYE2 586 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 OR10A4Q9H209 315 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 FANCMQ8IYD8 2048 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 NPIPA5A0A0B4J1W7 369 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 C10orf142B7Z368 130 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 NPIPA7E9PJI5 369 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 GNB5O14775 395 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 NPIPA8P0DM63 369 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 HAGHLQ6PII5 290 aaPredicted RBP16.42■□□□□ 0.22
RAB40C-203ENST00000535977 TMEM92Q6UXU6 159 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 TMEM99Q8N816 258 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 OR13H1Q8NG92 308 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 OR10H4Q8NGA5 316 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 OR6S1Q8NH40 331 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 ADAMTS18Q8TE60 1221 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 ENKD1Q9H0I2 346 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 MEPEQ9NQ76 525 aaPredicted RBP16.42■□□□□ 0.22
RAB40C-203ENST00000535977 DTX4Q9Y2E6 619 aa16.42■□□□□ 0.22
RAB40C-203ENST00000535977 IGF2P01344 180 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 IFNA4P05014 189 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 SBK2P0C263 348 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 RFC3P40938 356 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 NHLRC1Q6VVB1 395 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 THSD4Q6ZMP0 1018 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 SLC37A2Q8TED4 501 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 NARS2Q96I59 477 aaKnown RBP16.41■□□□□ 0.22
RAB40C-203ENST00000535977 TIMP4Q99727 224 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 MED20Q9H944 212 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 MRPL15Q9P015 296 aaKnown RBP16.41■□□□□ 0.22
RAB40C-203ENST00000535977 MRPS33Q9Y291 106 aaKnown RBP16.41■□□□□ 0.22
RAB40C-203ENST00000535977 A0A1B0GWA3 101 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 TCRBV21S2A2A0A5A6 115 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 EIF1BO60739 113 aaKnown RBP16.41■□□□□ 0.22
RAB40C-203ENST00000535977 PVALBP20472 110 aaPredicted RBP16.41■□□□□ 0.22
RAB40C-203ENST00000535977 SLC2A5P22732 501 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 SHC1P29353 583 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 EIF1P41567 113 aaKnown RBP16.41■□□□□ 0.22
RAB40C-203ENST00000535977 LGALS3BPQ08380 585 aa16.41■□□□□ 0.22
RAB40C-203ENST00000535977 KLF9Q13886 244 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms