RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 TBRG1Q3YBR2 411 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 TTC33Q6PID6 262 aaPredicted RBP10.4□□□□□ -0.74
KNTC1-208ENST00000535410 HIST3H2AQ7L7L0 130 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 RETREG3Q86VR2 466 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 PTOV1Q86YD1 416 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 KDM8Q8N371 416 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 SMYD1Q8NB12 490 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 IL17RDQ8NFM7 739 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 OR1K1Q8NGR3 316 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 OR10A6Q8NH74 314 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 ZNF417Q8TAU3 575 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 PROX1Q92786 737 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 HIST1H2ACQ93077 130 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 POM121Q96HA1 1249 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 LRR1Q96L50 414 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 ZNF587Q96SQ5 575 aaPredicted RBP10.4□□□□□ -0.74
KNTC1-208ENST00000535410 RHNO1Q9BSD3 238 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 KATNB1Q9BVA0 655 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 SLC19A3Q9BZV2 496 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 MRPL39Q9NYK5 338 aaKnown RBP10.4□□□□□ -0.74
KNTC1-208ENST00000535410 BAG5Q9UL15 447 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 PRR14LQ5THK1 2151 aa10.4□□□□□ -0.74
KNTC1-208ENST00000535410 CADP27708 2225 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 TRAPPC13A5PLN9 417 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 TRIM64A6NGJ6 449 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 TRIM64BA6NI03 449 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 SLC22A2O15244 555 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 CHP2O43745 196 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 SASH3O75995 380 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 ZNF432O94892 652 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 CD8AP01732 235 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 TP53P04637 393 aaPredicted RBP10.39□□□□□ -0.75
KNTC1-208ENST00000535410 CD247P20963 164 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 IFNA8P32881 189 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 CDKN1AP38936 164 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 FOXG1P55316 489 aaPredicted RBP10.39□□□□□ -0.75
KNTC1-208ENST00000535410 PUDPQ08623 228 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 DUSP7Q16829 419 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 GLIPR1L2Q4G1C9 344 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 NANOGP8Q6NSW7 305 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 CCDC80Q76M96 950 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 PXKQ7Z7A4 578 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 C10orf111Q8N326 155 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 OR4F15Q8NGB8 312 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 BCL2L2Q92843 193 aaPredicted RBP10.39□□□□□ -0.75
KNTC1-208ENST00000535410 LRRC58Q96CX6 371 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 SLC41A3Q96GZ6 507 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 ALKBH3Q96Q83 286 aaPredicted RBP10.39□□□□□ -0.75
KNTC1-208ENST00000535410 SLC38A2Q96QD8 506 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 ARHGDIGQ99819 225 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 POLR2J2Q9GZM3 115 aaKnown RBP10.39□□□□□ -0.75
KNTC1-208ENST00000535410 POLR2J3Q9H1A7 115 aaKnown RBP10.39□□□□□ -0.75
KNTC1-208ENST00000535410 NANOGQ9H9S0 305 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 MED4Q9NPJ6 270 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 FGFR1OP2Q9NVK5 253 aa10.39□□□□□ -0.75
KNTC1-208ENST00000535410 RAI1Q7Z5J4 1906 aaPredicted RBP10.39□□□□□ -0.75
KNTC1-208ENST00000535410 HIVEP2P31629 2446 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 NAV3Q8IVL0 2385 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 IGKV1D-42A0A075B6H8 117 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 E7EQL1 145 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 MRASO14807 208 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 UPK3AO75631 287 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 LY6G6DO95868 133 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 AHCYP23526 432 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 ARR3P36575 388 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 KLF10Q13118 480 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 TNK1Q13470 666 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 NPTX1Q15818 432 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 HIKESHIQ53FT3 197 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 ENTPD8Q5MY95 495 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 CLEC2AQ6UVW9 174 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 OR5J2Q8NH18 312 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 ADAMTS16Q8TE57 1224 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 NANOS1Q8WY41 292 aaKnown RBP10.38□□□□□ -0.75
KNTC1-208ENST00000535410 OR2M2Q96R28 347 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 SMR3AQ99954 134 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 PRR14Q9BWN1 585 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 PCDHAC1Q9H158 963 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 CRLF2Q9HC73 371 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 GPR35Q9HC97 309 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 SAR1AQ9NR31 198 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 NANSQ9NR45 359 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 B3GAT1Q9P2W7 334 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 CAPN7Q9Y6W3 813 aa10.38□□□□□ -0.75
KNTC1-208ENST00000535410 LOC100653049A0A140TA62 436 aa10.37□□□□□ -0.75
KNTC1-208ENST00000535410 HTR3EA5X5Y0 456 aa10.37□□□□□ -0.75
KNTC1-208ENST00000535410 CPSF4LA6NMK7 179 aaKnown RBP10.37□□□□□ -0.75
KNTC1-208ENST00000535410 ZNF99A8MXY4 864 aaPredicted RBP10.37□□□□□ -0.75
KNTC1-208ENST00000535410 MS4A18H0YCH9 400 aa10.37□□□□□ -0.75
KNTC1-208ENST00000535410 H7C417 338 aa10.37□□□□□ -0.75
KNTC1-208ENST00000535410 M0R3H8 397 aa10.37□□□□□ -0.75
KNTC1-208ENST00000535410 FBP2O00757 339 aa10.37□□□□□ -0.75
KNTC1-208ENST00000535410 PLPP3O14495 311 aa10.37□□□□□ -0.75
KNTC1-208ENST00000535410 NDUFAB1O14561 156 aa10.37□□□□□ -0.75
KNTC1-208ENST00000535410 CCDC22O60826 627 aa10.37□□□□□ -0.75
KNTC1-208ENST00000535410 KRT34O76011 436 aa10.37□□□□□ -0.75
KNTC1-208ENST00000535410 BGLAPP02818 100 aa10.37□□□□□ -0.75
KNTC1-208ENST00000535410 OPN1SWP03999 348 aa10.37□□□□□ -0.75
KNTC1-208ENST00000535410 ERCC1P07992 297 aaPredicted RBP10.37□□□□□ -0.75
KNTC1-208ENST00000535410 CSF3P09919 207 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms