RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 RPS4XP62701 263 aaKnown RBP8.39□□□□□ -1.07
SSBP3-215ENST00000533946 ROR2Q01974 943 aaKnown RBP8.39□□□□□ -1.07
SSBP3-215ENST00000533946 HGFACQ04756 655 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 RUNX1T1Q06455 604 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 DBPQ10586 325 aaPredicted RBP8.39□□□□□ -1.07
SSBP3-215ENST00000533946 CLEC12BQ2HXU8 276 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 SLC22A25Q6T423 547 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 C11orf65Q8NCR3 313 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 RBM15BQ8NDT2 890 aaKnown RBP8.39□□□□□ -1.07
SSBP3-215ENST00000533946 PFN4Q8NHR9 129 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 RCN3Q96D15 328 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 SLC41A3Q96GZ6 507 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 MS4A3Q96HJ5 214 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 RADILQ96JH8 1075 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 SF3B5Q9BWJ5 86 aaKnown RBP8.39□□□□□ -1.07
SSBP3-215ENST00000533946 TAPBPLQ9BX59 468 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 CACNG6Q9BXT2 260 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 GPR35Q9HC97 309 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 C20orf141Q9NUB4 165 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 THUMPD1Q9NXG2 353 aaKnown RBP8.39□□□□□ -1.07
SSBP3-215ENST00000533946 ZNF224Q9NZL3 707 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 RPS6KB2Q9UBS0 482 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 ATP23Q9Y6H3 246 aa8.39□□□□□ -1.07
SSBP3-215ENST00000533946 A0A096LNT2 108 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 SLC35F4A4IF30 521 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 TMEM247A6NEH6 219 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 KIAA1324LA8MWY0 1029 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-215ENST00000533946 J3KTA2 159 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 MRASO14807 208 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 SSX4O60224 188 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 CH25HO95992 272 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 CECR9P0C854 216 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 UQCRBP14927 111 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 FOSL1P15407 271 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 PPIBP23284 216 aaKnown RBP8.38□□□□□ -1.07
SSBP3-215ENST00000533946 TTKP33981 857 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 YAP1P46937 504 aaKnown RBP8.38□□□□□ -1.07
SSBP3-215ENST00000533946 UGT2B15P54855 530 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 IL1RL1Q01638 556 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 PIN1Q13526 163 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-215ENST00000533946 CAMK2DQ13557 499 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 MELKQ14680 651 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 VMACQ2NL98 169 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 CEACAM16Q2WEN9 425 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 TRMT5Q32P41 509 aaKnown RBP8.38□□□□□ -1.07
SSBP3-215ENST00000533946 ULK3Q6PHR2 472 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 H1FNTQ75WM6 255 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-215ENST00000533946 SLC46A3Q7Z3Q1 461 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 TSEN54Q7Z6J9 526 aaKnown RBP8.38□□□□□ -1.07
SSBP3-215ENST00000533946 BIVMQ86UB2 503 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 DTX2Q86UW9 622 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 ANKS4BQ8N8V4 417 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 ADAMTS16Q8TE57 1224 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 TMEM255BQ8WV15 326 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 STON2Q8WXE9 905 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 OXGR1Q96P68 337 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 CRLF2Q9HC73 371 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 ARGLU1Q9NWB6 273 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-215ENST00000533946 TAS2R5Q9NYW4 299 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 SLC7A7Q9UM01 511 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 RASD1Q9Y272 281 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 HIVEP2P31629 2446 aa8.38□□□□□ -1.07
SSBP3-215ENST00000533946 ARHGEF9O43307 516 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 HLA-HP01893 362 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 HEXAP06865 529 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 IFNGR1P15260 489 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 ZNF43P17038 809 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 FKBP2P26885 142 aaKnown RBP8.37□□□□□ -1.07
SSBP3-215ENST00000533946 FABP6P51161 128 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 POU3F1Q03052 451 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-215ENST00000533946 PIGFQ07326 219 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 VEZF1Q14119 521 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 FAM69AQ5T7M9 428 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 OTPQ5XKR4 325 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 ANKRD16Q6P6B7 361 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 LRFN4Q6PJG9 635 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 VHLLQ6RSH7 139 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 KLHL24Q6TFL4 600 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 PRSS57Q6UWY2 283 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 VTCN1Q7Z7D3 282 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 MDP1Q86V88 176 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 P2RY8Q86VZ1 359 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 CARM1Q86X55 608 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 KRT73Q86Y46 540 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 C10orf53Q8N6V4 93 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 ZNF525Q8N782 197 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 CLDN22Q8N7P3 220 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 MOSPD2Q8NHP6 518 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 DNAJA4Q8WW22 397 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-215ENST00000533946 SLC35B4Q969S0 331 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 FBXO17Q96EF6 278 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 SLC47A1Q96FL8 570 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 ZNF75AQ96N20 296 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 ZNF607Q96SK3 696 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 DHRS9Q9BPW9 319 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 REG4Q9BYZ8 158 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 TMEM27Q9HBJ8 222 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 FANCFQ9NPI8 374 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 TMEM45AQ9NWC5 275 aa8.37□□□□□ -1.07
SSBP3-215ENST00000533946 PARPBPQ9NWS1 579 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms