RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 FCGR2BP31994 310 aaPredicted RBP2.81□□□□□ -1.96
PTPRK-220ENST00000531466 MAS1LP35410 378 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 MAGEA3P43357 314 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 ARRB1P49407 418 aaPredicted RBP2.81□□□□□ -1.96
PTPRK-220ENST00000531466 PPT1P50897 306 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 NDST1P52848 882 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 CXCR4P61073 352 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 RPS6P62753 249 aaKnown RBP2.81□□□□□ -1.96
PTPRK-220ENST00000531466 CCZ1BP86790 482 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 CCZ1P86791 482 aaPredicted RBP2.81□□□□□ -1.96
PTPRK-220ENST00000531466 FLI1Q01543 452 aaPredicted RBP2.81□□□□□ -1.96
PTPRK-220ENST00000531466 CNTN2Q02246 1040 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 GABPAQ06546 454 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 RAD51Q06609 339 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 ARHGAP1Q07960 439 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 PDIA2Q13087 525 aaKnown RBP2.81□□□□□ -1.96
PTPRK-220ENST00000531466 SLAMF1Q13291 335 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 MADCAM1Q13477 382 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 MED21Q13503 144 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 CHI3L2Q15782 390 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 TOMM34Q15785 309 aaPredicted RBP2.81□□□□□ -1.96
PTPRK-220ENST00000531466 STXBP2Q15833 593 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 C5orf64Q2M2E5 130 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 ZNF699Q32M78 642 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 SUSD4Q5VX71 490 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 PRAMEF7Q5VXH5 474 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 ELP2Q6IA86 826 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 RHBDD2Q6NTF9 364 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 CLEC18BQ6UXF7 455 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 LRRC74BQ6ZQY2 392 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 TMEM26Q6ZUK4 368 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 ANKRD33Q7Z3H0 272 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 HDDC2Q7Z4H3 204 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 GPR141Q7Z602 305 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 NT5DC3Q86UY8 548 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 SLC26A11Q86WA9 606 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 TGIF2LXQ8IUE1 241 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 CRLF3Q8IUI8 442 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 NAXDQ8IW45 347 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 GCNT2Q8N0V5 402 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 GABRG1Q8N1C3 465 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 MFSD9Q8NBP5 474 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 ACBD4Q8NC06 268 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 OR10H4Q8NGA5 316 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 OR2L8Q8NGY9 312 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 RHEBL1Q8TAI7 183 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 C22orf15Q8WYQ4 148 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 SLC38A4Q969I6 547 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 NABP1Q96AH0 204 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 PINX1Q96BK5 328 aaKnown RBP2.81□□□□□ -1.96
PTPRK-220ENST00000531466 CERS2Q96G23 380 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 RILPQ96NA2 401 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 VPS35Q96QK1 796 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 ACCSQ96QU6 501 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 NPAS2Q99743 824 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 PRRT1Q99946 306 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 COPS4Q9BT78 406 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 C20orf24Q9BUV8 137 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 KIFC1Q9BW19 673 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 HINT2Q9BX68 163 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 GSDMCQ9BYG8 508 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 DEFB126Q9BYW3 111 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 POLR3FQ9H1D9 316 aaPredicted RBP2.81□□□□□ -1.96
PTPRK-220ENST00000531466 SLC38A1Q9H2H9 487 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 ACTR8Q9H981 624 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 XPNPEP1Q9NQW7 623 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 YAE1D1Q9NRH1 226 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 INIPQ9NRY2 104 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 TAS2R9Q9NYW1 312 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 MYEF2Q9P2K5 600 aaKnown RBP2.81□□□□□ -1.96
PTPRK-220ENST00000531466 SLC17A7Q9P2U7 560 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 ONECUT1Q9UBC0 465 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 ZNF639Q9UID6 485 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 ZNF346Q9UL40 294 aaKnown RBP2.81□□□□□ -1.96
PTPRK-220ENST00000531466 CLEC4EQ9ULY5 219 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 SLC22A13Q9Y226 551 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 RBMX2Q9Y388 322 aaKnown RBP2.81□□□□□ -1.96
PTPRK-220ENST00000531466 KIAA0232Q92628 1395 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 ERBINQ96RT1 1412 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 ZNF518AQ6AHZ1 1483 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 CECR2Q9BXF3 1484 aa2.81□□□□□ -1.96
PTPRK-220ENST00000531466 RB1CC1Q8TDY2 1594 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 ADGRL3Q9HAR2 1447 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 NID2Q14112 1375 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 EIF3AQ14152 1382 aaKnown RBP2.8□□□□□ -1.96
PTPRK-220ENST00000531466 KIF15Q9NS87 1388 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 ABCC4O15439 1325 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 A0A1B0GTI1 187 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 hCG_38984A0A1B0GV85 526 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 A0A1B0GW15 77 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 ANKDD1BA6NHY2 528 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 A6NIZ1 184 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 OR2AG2A6NM03 316 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 OR2AT4A6NND4 320 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 A8MU76 341 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 A8MX80 341 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 TMEM150CB9EJG8 249 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 E7EWF7 191 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 F8W036 122 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 RNASEK-C17orf49H0YIS7 233 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms