RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 MAL2Q969L2 176 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 OXGR1Q96P68 337 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 RSPO3Q9BXY4 272 aaPredicted RBP15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 TPK1Q9H3S4 243 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 CACYBPQ9HB71 228 aaKnown RBP15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 CRLF2Q9HC73 371 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 DYNLRB1Q9NP97 96 aa15.93■□□□□ 0.14
SSSCA1-206ENST00000531405 TRPC5OSA6NMA1 111 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 M0R082 166 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 TACSTD2P09758 323 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 IDO1P14902 403 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 CAPZA2P47755 286 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 WDR4P57081 412 aaKnown RBP15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 IL1RL1Q01638 556 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 SNTB2Q13425 540 aaKnown RBP15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 C1DQ13901 141 aaKnown RBP15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 ADRM1Q16186 407 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 SLC9B1Q4ZJI4 515 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 C6orf10Q5SRN2 563 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 CEP85LQ5SZL2 805 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 ZNF417Q8TAU3 575 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 CKAP2Q8WWK9 683 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 NEU4Q8WWR8 484 aaPredicted RBP15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 TAAR8Q969N4 342 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 ITCHQ96J02 903 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 ANKRD27Q96NW4 1050 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 OR2M2Q96R28 347 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 ZNF587Q96SQ5 575 aaPredicted RBP15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 ARMC7Q9H6L4 198 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 NOX3Q9HBY0 568 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 MOV10Q9HCE1 1003 aaKnown RBP15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 IFT52Q9Y366 437 aa15.92■□□□□ 0.14
SSSCA1-206ENST00000531405 TMEM247A6NEH6 219 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 AIM2O14862 343 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 SNNO75324 88 aaPredicted RBP15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 ERCC1P07992 297 aaPredicted RBP15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 ADRA2AP08913 450 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 GRPRP30550 384 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 ARR3P36575 388 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 CCNIQ14094 377 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 DAG1Q14118 895 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 MSMPQ1L6U9 139 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 LIPNQ5VXI9 398 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 CARD17Q5XLA6 110 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 COMTD1Q86VU5 262 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 TMEM123Q8N131 208 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 ZNF786Q8N393 782 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 ANKK1Q8NFD2 765 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 MGARPQ8TDB4 240 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 UBASH3BQ8TF42 649 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 RMND5AQ9H871 391 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 THAP1Q9NVV9 213 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 RPS6KB2Q9UBS0 482 aa15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 TMEFF2Q9UIK5 374 aaPredicted RBP15.91■□□□□ 0.14
SSSCA1-206ENST00000531405 IGKV1D-42A0A075B6H8 117 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 VSTM5A8MXK1 200 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 M0R3G1 203 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 TRAF3IP2O43734 574 aaPredicted RBP15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 FZD7O75084 574 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 HPRP00739 348 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 IFNGR1P15260 489 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 HTR2AP28223 471 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 SRP14P37108 136 aaKnown RBP15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 POLR2JP52435 117 aaKnown RBP15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 RIN1Q13671 783 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 RGNQ15493 299 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 C6orf89Q6UWU4 347 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 MAVSQ7Z434 540 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 LINC01356Q8N9X3 169 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 PIK3C3Q8NEB9 887 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 HPS1Q92902 700 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 MS4A3Q96HJ5 214 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 MAELQ96JY0 434 aaKnown RBP15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 OR52B2Q96RD2 323 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 ZIM2Q9NZV7 527 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 FBXO9Q9UK97 447 aaPredicted RBP15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 PCDHB14Q9Y5E9 798 aa15.9■□□□□ 0.14
SSSCA1-206ENST00000531405 A0A1B0GWA3 101 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 ZNF99A8MXY4 864 aaPredicted RBP15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 TCF21O43680 179 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 HLA-HP01893 362 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 HLA-DOBP13765 273 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 ITGA2P17301 1181 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 CDH15P55291 814 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 FAM69AQ5T7M9 428 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 SLC2A7Q6PXP3 512 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 RINLQ6ZS11 566 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 MSANTD1Q6ZTZ1 278 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 WDFY1Q8IWB7 410 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 RFLNBQ8N5W9 214 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 BBS10Q8TAM1 723 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 SLC38A4Q969I6 547 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 EMC6Q9BV81 110 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 MRPL37Q9BZE1 423 aaKnown RBP15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 PAIP1Q9H074 479 aaKnown RBP15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 BCL2L10Q9HD36 194 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 A4GALTQ9NPC4 353 aa15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 SDR39U1Q9NRG7 319 aaPredicted RBP15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 THUMPD1Q9NXG2 353 aaKnown RBP15.89■□□□□ 0.13
SSSCA1-206ENST00000531405 B3GNT2Q9NY97 397 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms