RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 TMEM45AQ9NWC5 275 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 MKS1Q9NXB0 559 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 STX18Q9P2W9 335 aaKnown RBP8.6□□□□□ -1.03
CAPN1-210ENST00000527699 SEC14L4Q9UDX3 406 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 TRAPPC4Q9Y296 219 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 YLPM1P49750 1951 aaKnown RBP8.6□□□□□ -1.03
CAPN1-210ENST00000527699 VWFP04275 2813 aa8.6□□□□□ -1.03
CAPN1-210ENST00000527699 CCDC154A6NI56 674 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 hCG_2039718K7EN88 272 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 FRS3O43559 492 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 EIF1BO60739 113 aaKnown RBP8.59□□□□□ -1.03
CAPN1-210ENST00000527699 FKBP6O75344 327 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 STAMBPO95630 424 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 CRYAAP02489 173 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 GPIP06744 558 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 CECR9P0C854 216 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 PRG2P13727 222 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 DAOP14920 347 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 ZNF23P17027 643 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 NCF2P19878 526 aaPredicted RBP8.59□□□□□ -1.03
CAPN1-210ENST00000527699 TCN1P20061 433 aaPredicted RBP8.59□□□□□ -1.03
CAPN1-210ENST00000527699 BGNP21810 368 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 APEX1P27695 318 aaKnown RBP8.59□□□□□ -1.03
CAPN1-210ENST00000527699 IL12AP29459 219 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 THBS4P35443 961 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 SLC1A3P43003 542 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 HTR3AP46098 478 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 CAPZA2P47755 286 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 CLK1P49759 484 aaKnown RBP8.59□□□□□ -1.03
CAPN1-210ENST00000527699 IDH3GP51553 393 aaPredicted RBP8.59□□□□□ -1.03
CAPN1-210ENST00000527699 CLDN17P56750 224 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 ABCE1P61221 599 aaKnown RBP8.59□□□□□ -1.03
CAPN1-210ENST00000527699 NAAAQ02083 359 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 TRMT5Q32P41 509 aaKnown RBP8.59□□□□□ -1.03
CAPN1-210ENST00000527699 CARD17Q5XLA6 110 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 ANKRD16Q6P6B7 361 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 PAQR6Q6TCH4 344 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 THSD4Q6ZMP0 1018 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 RINLQ6ZS11 566 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 SSX8Q7RTT4 187 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 C17orf78Q8N4C9 275 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 VPS37AQ8NEZ2 397 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 OR8J2Q8NGG1 315 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 OR52P1PQ8NH57 321 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 BCL2L2Q92843 193 aaPredicted RBP8.59□□□□□ -1.03
CAPN1-210ENST00000527699 PMM1Q92871 262 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 PANX1Q96RD7 426 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 TAPBPLQ9BX59 468 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 NPHS2Q9NP85 383 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 EXOSC3Q9NQT5 275 aaKnown RBP8.59□□□□□ -1.03
CAPN1-210ENST00000527699 POLE3Q9NRF9 147 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 TRIM33Q9UPN9 1127 aa8.59□□□□□ -1.03
CAPN1-210ENST00000527699 LOC390937A0A1W2PQ73 354 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 DPPA5A6NC42 116 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 ZNF503-AS2A6NEH8 195 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 AGAP5A6NIR3 686 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 OR6C65A6NJZ3 312 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 AQP7P3A6NL99 342 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 ZNF587BE7ETH6 402 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 E9PBE3 544 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 ZNF208O43345 1280 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 DNPH1O43598 174 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 BCHEP06276 602 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 ALDOCP09972 364 aaKnown RBP8.58□□□□□ -1.04
CAPN1-210ENST00000527699 VSIG8P0DPA2 414 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 ETFAP13804 333 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 LBPP18428 481 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 RPS5P46782 204 aaKnown RBP8.58□□□□□ -1.04
CAPN1-210ENST00000527699 SLC1A6P48664 564 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 ARF1P84077 181 aaKnown RBP8.58□□□□□ -1.04
CAPN1-210ENST00000527699 HGFACQ04756 655 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 RCN1Q15293 331 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 MAPK11Q15759 364 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 ADRM1Q16186 407 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 GTDC1Q4AE62 458 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 PRAMEF8Q5VWM4 474 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 PRAMEF7Q5VXH5 474 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 KRT80Q6KB66 452 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 CREB3L2Q70SY1 520 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 NET1Q7Z628 596 aaPredicted RBP8.58□□□□□ -1.04
CAPN1-210ENST00000527699 CARM1Q86X55 608 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 CDK20Q8IZL9 346 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 CLIP4Q8N3C7 705 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 POMGNT2Q8NAT1 580 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 C1orf162Q8NEQ5 155 aaPredicted RBP8.58□□□□□ -1.04
CAPN1-210ENST00000527699 TMEM45BQ96B21 275 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 ZNF837Q96EG3 531 aaPredicted RBP8.58□□□□□ -1.04
CAPN1-210ENST00000527699 OR52E6Q96RD3 313 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 SORT1Q99523 831 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 ZNF184Q99676 751 aaPredicted RBP8.58□□□□□ -1.04
CAPN1-210ENST00000527699 OCEL1Q9H607 264 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 DENND2DQ9H6A0 471 aaPredicted RBP8.58□□□□□ -1.04
CAPN1-210ENST00000527699 DYNLRB1Q9NP97 96 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 SLC6A13Q9NSD5 602 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 ASIC5Q9NY37 505 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 NKX1-2Q9UD57 310 aaPredicted RBP8.58□□□□□ -1.04
CAPN1-210ENST00000527699 FZR1Q9UM11 496 aa8.58□□□□□ -1.04
CAPN1-210ENST00000527699 BIRC6Q9NR09 4857 aa8.57□□□□□ -1.04
CAPN1-210ENST00000527699 B9A039 149 aa8.57□□□□□ -1.04
CAPN1-210ENST00000527699 NDUFS8O00217 210 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms