RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ANGPTL8Q6UXH0 198 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 TMEM64Q6YI46 380 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 HSDL2Q6YN16 418 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 CREB3L2Q70SY1 520 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 RRM2BQ7LG56 351 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 OR2L13Q8N349 312 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 PARP16Q8N5Y8 322 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 ZNF321PQ8N8H1 164 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 ZNF615Q8N8J6 731 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 CDRT4Q8N9R6 151 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 OR7G2Q8NG99 324 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 OR52R1Q8NGF1 315 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 OR5AK3PQ8NH89 298 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 M1APQ8TC57 530 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 SFXN5Q8TD22 340 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 TMED6Q8WW62 240 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 SNAPC3Q92966 411 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 NCLNQ969V3 563 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 NEURL3Q96EH8 262 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 C16orf58Q96GQ5 468 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 CDRT15Q96T59 188 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 CGREF1Q99674 301 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 ECSITQ9BQ95 431 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 BTBD10Q9BSF8 475 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 DEFB126Q9BYW3 111 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 C1orf21Q9H246 121 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 MUC13Q9H3R2 512 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 RAD21L1Q9H4I0 556 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 NANOGQ9H9S0 305 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 TPT1P8Q9HAU6 139 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 MMP25Q9NPA2 562 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 CYSLTR2Q9NS75 346 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 SLC6A13Q9NSD5 602 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 TAS2R1Q9NYW7 299 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 SLC25A37Q9NYZ2 338 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 ADA2Q9NZK5 511 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 COPS7AQ9UBW8 275 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 FBXL4Q9UKA2 621 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 PPIEQ9UNP9 301 aaKnown RBP4.04□□□□□ -1.76
USP48-211ENST00000526044 LYVE1Q9Y5Y7 322 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 A3GALT2U3KPV4 340 aa4.04□□□□□ -1.76
USP48-211ENST00000526044 C15orf38-AP3S2A0A0A6YYH1 394 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 TRBV11-1A0A0K0K1C0 115 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 hCG_1809904A0A1W2PP81 198 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 A0A1W2PPE2 198 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 A0A1W2PQ72 361 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 A0A1W2PR64 198 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 MED19A0JLT2 244 aaPredicted RBP4.03□□□□□ -1.76
USP48-211ENST00000526044 ARGFXA6NJG6 315 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 TSPAN4O14817 238 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 TIMM23O14925 209 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 NME6O75414 186 aaPredicted RBP4.03□□□□□ -1.76
USP48-211ENST00000526044 NDUFB4O95168 129 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 CH25HO95992 272 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 C1QCP02747 245 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 CLPSP04118 112 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 IGKV3-11P04433 115 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 SERPINA7P05543 415 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 TPOP07202 933 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 CT45A8P0DMV1 189 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 CT45A9P0DMV2 189 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 OR12D1P0DN82 309 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 PRKAR1AP10644 381 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 GPX2P18283 190 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 POU1F1P28069 291 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 PTPN6P29350 595 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 GABRA3P34903 492 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 CPOXP36551 454 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 PPICP45877 212 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 EMDP50402 254 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 PDLIM4P50479 330 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 CCL11P51671 97 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 NR0B1P51843 470 aaKnown RBP4.03□□□□□ -1.76
USP48-211ENST00000526044 AIMP2Q13155 320 aaKnown RBP4.03□□□□□ -1.76
USP48-211ENST00000526044 SRSF6Q13247 344 aaKnown RBP4.03□□□□□ -1.76
USP48-211ENST00000526044 RGNQ15493 299 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 ZSCAN26Q16670 478 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 DEFB109BQ30KR1 87 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 GTDC1Q4AE62 458 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 DNAL1Q4LDG9 190 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 LACTB2Q53H82 288 aaPredicted RBP4.03□□□□□ -1.76
USP48-211ENST00000526044 CT45A2Q5DJT8 189 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 DCAF10Q5QP82 559 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.03□□□□□ -1.76
USP48-211ENST00000526044 ATAD3BQ5T9A4 648 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 IRAK1BP1Q5VVH5 260 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 SAXO2Q658L1 398 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 MFSD12Q6NUT3 480 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 H3F3CQ6NXT2 135 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 CDC73Q6P1J9 531 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 C11orf88Q6PI97 169 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 MEX3BQ6ZN04 569 aaKnown RBP4.03□□□□□ -1.76
USP48-211ENST00000526044 ARPINQ7Z6K5 226 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 IFNEQ86WN2 208 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 RPS19BP1Q86WX3 136 aaKnown RBP4.03□□□□□ -1.76
USP48-211ENST00000526044 RNF130Q86XS8 419 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 MSRB3Q8IXL7 192 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 DEFB107AQ8IZN7 70 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 PGAM4Q8N0Y7 254 aa4.03□□□□□ -1.76
USP48-211ENST00000526044 KIF2BQ8N4N8 673 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms