RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 SAR1AQ9NR31 198 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 AP3M1Q9Y2T2 418 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 NDUFAF1Q9Y375 327 aa5.7□□□□□ -1.5
CD44-221ENST00000526000 CUBNO60494 3623 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 ZNF503-AS2A6NEH8 195 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 CCDC154A6NI56 674 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 VSTM5A8MXK1 200 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 TMEM229AB2RXF0 380 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 ZNF587BE7ETH6 402 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 HMGN4O00479 90 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 ANGPT2O15123 496 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 FRS3O43559 492 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 IGFBP1P08833 259 aaPredicted RBP5.69□□□□□ -1.5
CD44-221ENST00000526000 ZCCHC18P0CG32 403 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 EGR1P18146 543 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 PPIBP23284 216 aaKnown RBP5.69□□□□□ -1.5
CD44-221ENST00000526000 CDKN2CP42773 168 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 ALDH3B1P43353 468 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 HTR3AP46098 478 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 KHKP50053 298 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 ANXA11P50995 505 aaKnown RBP5.69□□□□□ -1.5
CD44-221ENST00000526000 ACTG1P63261 375 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 EPS8Q12929 822 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 KLF10Q13118 480 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 KRT72Q14CN4 511 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 MAD2L1BPQ15013 274 aaPredicted RBP5.69□□□□□ -1.5
CD44-221ENST00000526000 MSMPQ1L6U9 139 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 FAM174BQ3ZCQ3 159 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 AGKQ53H12 422 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 MRPL2Q5T653 305 aaKnown RBP5.69□□□□□ -1.5
CD44-221ENST00000526000 SAXO2Q658L1 398 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 FAHD2BQ6P2I3 314 aaPredicted RBP5.69□□□□□ -1.5
CD44-221ENST00000526000 PAQR6Q6TCH4 344 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 DEF8Q6ZN54 512 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 CREB3L2Q70SY1 520 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 ZNF771Q7L3S4 317 aaPredicted RBP5.69□□□□□ -1.5
CD44-221ENST00000526000 MDP1Q86V88 176 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 LRP11Q86VZ4 500 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 EPHX4Q8IUS5 362 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 CLIP4Q8N3C7 705 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 C17orf78Q8N4C9 275 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 DPP10Q8N608 796 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 C3orf56Q8N813 242 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 POMGNT2Q8NAT1 580 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 PCYOX1LQ8NBM8 494 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 ZNF540Q8NDQ6 660 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 FAM71CQ8NEG0 241 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 C1orf162Q8NEQ5 155 aaPredicted RBP5.69□□□□□ -1.5
CD44-221ENST00000526000 WDR60Q8WVS4 1066 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 GCDHQ92947 438 aaPredicted RBP5.69□□□□□ -1.5
CD44-221ENST00000526000 TMEM45BQ96B21 275 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 SPDL1Q96EA4 605 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 THOC1Q96FV9 657 aaKnown RBP5.69□□□□□ -1.5
CD44-221ENST00000526000 FAHD2AQ96GK7 314 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 MS4A3Q96HJ5 214 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 TEX37Q96LM6 180 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 OR52E6Q96RD3 313 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 SYT3Q9BQG1 590 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 SAP130Q9H0E3 1048 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 MYLK2Q9H1R3 596 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 SLC38A1Q9H2H9 487 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 PLK3Q9H4B4 646 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 MTHFD2LQ9H903 347 aaPredicted RBP5.69□□□□□ -1.5
CD44-221ENST00000526000 CRLF2Q9HC73 371 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 THUMPD1Q9NXG2 353 aaKnown RBP5.69□□□□□ -1.5
CD44-221ENST00000526000 SEC14L4Q9UDX3 406 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 LEF1Q9UJU2 399 aaPredicted RBP5.69□□□□□ -1.5
CD44-221ENST00000526000 CORO2BQ9UQ03 480 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 GMEB1Q9Y692 573 aa5.69□□□□□ -1.5
CD44-221ENST00000526000 A0A096LPI6 279 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 IGHV2OR16-5A0A0B4J2B6 119 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 AGAP5A6NIR3 686 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 AQP7P3A6NL99 342 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 FAM157AC9JC47 383 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 M0R3G1 203 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 RFXANKO14593 260 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 ZNF208O43345 1280 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 DNPH1O43598 174 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 CDC14BO60729 498 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 KRT75O95678 551 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 AGR2O95994 175 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 HPXP02790 462 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 PATE4P0C8F1 98 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 CD79AP11912 226 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 CBR1P16152 277 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 FKBP2P26885 142 aaKnown RBP5.68□□□□□ -1.5
CD44-221ENST00000526000 IL12AP29459 219 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 ACAA2P42765 397 aaKnown RBP5.68□□□□□ -1.5
CD44-221ENST00000526000 RPS5P46782 204 aaKnown RBP5.68□□□□□ -1.5
CD44-221ENST00000526000 P2RY4P51582 365 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 CDH15P55291 814 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 FADDQ13158 208 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 SNTB2Q13425 540 aaKnown RBP5.68□□□□□ -1.5
CD44-221ENST00000526000 C1DQ13901 141 aaKnown RBP5.68□□□□□ -1.5
CD44-221ENST00000526000 CYLC2Q14093 348 aaPredicted RBP5.68□□□□□ -1.5
CD44-221ENST00000526000 DAG1Q14118 895 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 ZSWIM7Q19AV6 140 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 CEACAM16Q2WEN9 425 aa5.68□□□□□ -1.5
CD44-221ENST00000526000 RPS26P11Q5JNZ5 115 aaPredicted RBP5.68□□□□□ -1.5
CD44-221ENST00000526000 PHYHD1Q5SRE7 291 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms