RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 SYT14Q8NB59 555 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 OR4C15Q8NGM1 316 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 OR6K3Q8NGY3 331 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 OR2T29Q8NH02 315 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 OR5J2Q8NH18 312 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 LRTOMTQ8WZ04 291 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 HIST1H2ACQ93077 130 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 APH1AQ96BI3 265 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF837Q96EG3 531 aaPredicted RBP4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 HS6ST2Q96MM7 605 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 FOXN4Q96NZ1 517 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 OXGR1Q96P68 337 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 ALKBH3Q96Q83 286 aaPredicted RBP4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 OR2M2Q96R28 347 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 FUZQ9BT04 418 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 MUC13Q9H3R2 512 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 RERGLQ9H628 205 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 DENND2DQ9H6A0 471 aaPredicted RBP4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 EGLN3Q9H6Z9 239 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 EVA1AQ9H8M9 152 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 BCO1Q9HAY6 547 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 MCCC2Q9HCC0 563 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 PLSCR4Q9NRQ2 329 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 MRPL39Q9NYK5 338 aaKnown RBP4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF629Q9UEG4 869 aaPredicted RBP4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF346Q9UL40 294 aaKnown RBP4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 TMCC3Q9ULS5 477 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 RASD1Q9Y272 281 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 ADAM18Q9Y3Q7 739 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 LYVE1Q9Y5Y7 322 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 FAM208BQ5VWN6 2430 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 IGKV3D-15A0A087WSY6 115 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 A0A096LPE4 126 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 IGKV1D-43A0A0B4J1Z2 117 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 A0A1W2PPZ6 126 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 A0A1W2PRQ8 180 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 UNC119BA6NIH7 251 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 SAC3D1A6NKF1 404 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF724A8MTY0 619 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 H3BNX3 289 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 SOCS2O14508 198 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 MSTNO14793 375 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 CLOCKO15516 846 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 OR2T1O43869 369 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 ENTPD5O75356 428 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 E2F6O75461 281 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 KRT36O76013 467 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 CCNB2O95067 398 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 PPP1R3DO95685 299 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 GPANK1O95872 356 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 IL18BPO95998 194 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 MT-ATP6P00846 226 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 ITGA5P08648 1049 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 THRBP10828 461 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 PRF1P14222 555 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 IGHV1-2P23083 117 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 FKBP2P26885 142 aaKnown RBP4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 POU1F1P28069 291 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 RPL4P36578 427 aaKnown RBP4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 CD79BP40259 229 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 MAGEA2P43356 314 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 LIMS1P48059 325 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 GSSP48637 474 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 MAP2K6P52564 334 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC16A1P53985 500 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 FXYD6P3P58550 94 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 CTXN1P60606 82 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 ROR2Q01974 943 aaKnown RBP4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 GABPB1Q06547 395 aaPredicted RBP4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 FMODQ06828 376 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 DGCR6Q14129 220 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 ACKR1Q16570 336 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC25A35Q3KQZ1 300 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 HIKESHIQ53FT3 197 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 ALG10Q5BKT4 473 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 MTX3Q5HYI7 312 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 CLEC12AQ5QGZ9 265 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC35F1Q5T1Q4 408 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 PGBD2Q6P3X8 592 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 NHLRC1Q6VVB1 395 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 STAC2Q6ZMT1 411 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 PIWIL3Q7Z3Z3 882 aaKnown RBP4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 KIF18BQ86Y91 864 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 WFDC8Q8IUA0 241 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 CDK20Q8IZL9 346 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 IQCF1Q8N6M8 205 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 AQP11Q8NBQ7 271 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 OR8D4Q8NGM9 314 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 OR52N5Q8NH56 324 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 NSMAFQ92636 917 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 RNASE6Q93091 150 aaKnown RBP4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 S100PBPQ96BU1 408 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 RASD2Q96D21 266 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 DHRS1Q96LJ7 313 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 SAMD8Q96LT4 415 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 Q96M85 177 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 WFIKKN1Q96NZ8 548 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 TSPAN32Q96QS1 320 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF347Q96SE7 839 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 FEVQ99581 238 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms