RNA–Protein interactions for RNA: ENST00000523504.5

TNFRSF10B-207, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 1,464 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-207ENST00000523504 NTF4P34130 210 aa19.24■□□□□ 0.67
TNFRSF10B-207ENST00000523504 POU3F1Q03052 451 aaPredicted RBP19.24■□□□□ 0.67
TNFRSF10B-207ENST00000523504 FOXF2Q12947 444 aa19.24■□□□□ 0.67
TNFRSF10B-207ENST00000523504 SLC36A3Q495N2 470 aa19.24■□□□□ 0.67
TNFRSF10B-207ENST00000523504 ALG10Q5BKT4 473 aa19.24■□□□□ 0.67
TNFRSF10B-207ENST00000523504 CLEC12AQ5QGZ9 265 aa19.24■□□□□ 0.67
TNFRSF10B-207ENST00000523504 SMARCD3Q6STE5 483 aa19.24■□□□□ 0.67
TNFRSF10B-207ENST00000523504 CD300LDQ6UXZ3 194 aa19.24■□□□□ 0.67
TNFRSF10B-207ENST00000523504 GALNT4Q8N4A0 578 aa19.24■□□□□ 0.67
TNFRSF10B-207ENST00000523504 OR9K2Q8NGE7 335 aa19.24■□□□□ 0.67
TNFRSF10B-207ENST00000523504 MBD3L2Q8NHZ7 208 aaPredicted RBP19.24■□□□□ 0.67
TNFRSF10B-207ENST00000523504 WNT2BQ93097 391 aa19.24■□□□□ 0.67
TNFRSF10B-207ENST00000523504 RBM4BQ9BQ04 359 aaKnown RBP19.24■□□□□ 0.67
TNFRSF10B-207ENST00000523504 RBM4Q9BWF3 364 aaKnown RBP19.24■□□□□ 0.67
TNFRSF10B-207ENST00000523504 CDH10Q9Y6N8 788 aa19.24■□□□□ 0.67
TNFRSF10B-207ENST00000523504 STSP08842 583 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 GSTM3P21266 225 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 EPHA2P29317 976 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 PTGER4P35408 488 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 POLR2IP36954 125 aaKnown RBP19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 ALDH3A2P51648 485 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 ZP4Q12836 540 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 MELKQ14680 651 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 NHLRC1Q6VVB1 395 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 TUSC5Q8IXB3 177 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 PRR7Q8TB68 274 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 TXNDC15Q96J42 360 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 ZNF385AQ96PM9 386 aaKnown RBP19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 MED29Q9NX70 200 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 USE1Q9NZ43 259 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 RASD1Q9Y272 281 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 POFUT2Q9Y2G5 429 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 ADAM18Q9Y3Q7 739 aa19.23■□□□□ 0.67
TNFRSF10B-207ENST00000523504 TRAF3IP2O43734 574 aaPredicted RBP19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 OSMP13725 252 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 PMPCAQ10713 525 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 TOP3AQ13472 1001 aaPredicted RBP19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 RFX4Q33E94 735 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 ZIK1Q3SY52 487 aaPredicted RBP19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 EEF1A1P5Q5VTE0 462 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 CREB3L2Q70SY1 520 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 IQCF1Q8N6M8 205 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 ZIC4Q8N9L1 334 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 INTS12Q96CB8 462 aaKnown RBP19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 OXGR1Q96P68 337 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 DMRTA2Q96SC8 542 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 KATNB1Q9BVA0 655 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 FANCFQ9NPI8 374 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 MEMO1Q9Y316 297 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 FLVCR1Q9Y5Y0 555 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 NBASA2RRP1 2371 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 H3BN98 237 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 DLGAP1O14490 977 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 NDUFB2O95178 105 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 PPP1R3DO95685 299 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 FCGR2AP12318 317 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 EDNRAP25101 427 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 POU1F1P28069 291 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 RPL4P36578 427 aaKnown RBP19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 SLC16A1P53985 500 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 CTXN1P60606 82 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 ERVK-25P63136 954 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 COX10Q12887 443 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 FJX1Q86VR8 437 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 UEVLDQ8IX04 471 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 SLC43A2Q8N370 569 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 OR4Q3Q8NH05 313 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 EMC6Q9BV81 110 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 INIPQ9NRY2 104 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 TBC1D23Q9NUY8 699 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 IL20Q9NYY1 176 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 KLHL9Q9P2J3 617 aa19.22■□□□□ 0.67
TNFRSF10B-207ENST00000523504 CCL21O00585 134 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 IFNGR1P15260 489 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 ZNF43P17038 809 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 AGTR1P30556 359 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 PTDSS1P48651 473 aaKnown RBP19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 CASP6P55212 293 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 PRPS1P60891 318 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 SIRPAP78324 504 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 RNPS1Q15287 305 aaKnown RBP19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 POU4F3Q15319 338 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 SF3B4Q15427 424 aaKnown RBP eCLIP19.21■□□□□ 0.675e-7■■■□□ 16.4
TNFRSF10B-207ENST00000523504 GUSBP1Q15486 140 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 TMEM236Q5W0B7 351 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 PXKQ7Z7A4 578 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 MCEMP1Q8IX19 187 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 TSPAN32Q96QS1 320 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 MBOAT4Q96T53 435 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 SF3B5Q9BWJ5 86 aaKnown RBP19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 RIBC2Q9H4K1 309 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 BCO1Q9HAY6 547 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 ESPL1Q14674 2120 aa19.21■□□□□ 0.67
TNFRSF10B-207ENST00000523504 POLEQ07864 2286 aa19.2■□□□□ 0.66
TNFRSF10B-207ENST00000523504 IGKV3D-15A0A087WSY6 115 aa19.2■□□□□ 0.66
TNFRSF10B-207ENST00000523504 A0A0G2JNJ9 132 aa19.2■□□□□ 0.66
TNFRSF10B-207ENST00000523504 SS18L1O75177 396 aaPredicted RBP19.2■□□□□ 0.66
TNFRSF10B-207ENST00000523504 RCBTB2O95199 551 aa19.2■□□□□ 0.66
TNFRSF10B-207ENST00000523504 SNAP29O95721 258 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms