RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ZBTB18Q99592 522 aa22.34■■□□□ 1.17
PVT1-219ENST00000523427 PTDSS2Q9BVG9 487 aa22.34■■□□□ 1.17
PVT1-219ENST00000523427 SLC6A13Q9NSD5 602 aa22.34■■□□□ 1.17
PVT1-219ENST00000523427 TREM2Q9NZC2 230 aa22.34■■□□□ 1.17
PVT1-219ENST00000523427 FZR1Q9UM11 496 aa22.34■■□□□ 1.17
PVT1-219ENST00000523427 ZNF232Q9UNY5 417 aa22.34■■□□□ 1.17
PVT1-219ENST00000523427 USP22Q9UPT9 525 aa22.34■■□□□ 1.17
PVT1-219ENST00000523427 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.34■■□□□ 1.17
PVT1-219ENST00000523427 A0A096LPI6 279 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 FAM157AC9JC47 383 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 M0R233 179 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 RFXANKO14593 260 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 HPXP02790 462 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 BGNP21810 368 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 ALDH3B1P43353 468 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 SEC24CP53992 1094 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 CRISP3P54108 245 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 ELFN2Q5R3F8 820 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 C3orf56Q8N813 242 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 IL17RDQ8NFM7 739 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 SLC38A5Q8WUX1 472 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 TMEM186Q96B77 213 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 ROPN1BQ9BZX4 212 aaPredicted RBP22.33■■□□□ 1.17
PVT1-219ENST00000523427 ROPN1Q9HAT0 212 aaPredicted RBP22.33■■□□□ 1.17
PVT1-219ENST00000523427 AIG1Q9NVV5 245 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 CALML5Q9NZT1 146 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 B3GAT1Q9P2W7 334 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 CHST2Q9Y4C5 530 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 NOX1Q9Y5S8 564 aa22.33■■□□□ 1.17
PVT1-219ENST00000523427 M0R082 166 aa22.32■■□□□ 1.16
PVT1-219ENST00000523427 WNT9BO14905 357 aa22.32■■□□□ 1.16
PVT1-219ENST00000523427 SYNGR3O43761 229 aa22.32■■□□□ 1.16
PVT1-219ENST00000523427 NR4A1P22736 598 aa22.32■■□□□ 1.16
PVT1-219ENST00000523427 DSTNP60981 165 aa22.32■■□□□ 1.16
PVT1-219ENST00000523427 EGR4Q05215 589 aa22.32■■□□□ 1.16
PVT1-219ENST00000523427 MAD2L1BPQ15013 274 aaPredicted RBP22.32■■□□□ 1.16
PVT1-219ENST00000523427 PHYHD1Q5SRE7 291 aa22.32■■□□□ 1.16
PVT1-219ENST00000523427 PIK3C3Q8NEB9 887 aa22.32■■□□□ 1.16
PVT1-219ENST00000523427 SEMA6DQ8NFY4 1073 aa22.32■■□□□ 1.16
PVT1-219ENST00000523427 ZNF417Q8TAU3 575 aa22.32■■□□□ 1.16
PVT1-219ENST00000523427 GCDHQ92947 438 aaPredicted RBP22.32■■□□□ 1.16
PVT1-219ENST00000523427 MRPL24Q96A35 216 aaKnown RBP22.32■■□□□ 1.16
PVT1-219ENST00000523427 ZNF587Q96SQ5 575 aaPredicted RBP22.32■■□□□ 1.16
PVT1-219ENST00000523427 RPS6KB2Q9UBS0 482 aa22.32■■□□□ 1.16
PVT1-219ENST00000523427 GRIP1Q9Y3R0 1128 aa22.32■■□□□ 1.16
PVT1-219ENST00000523427 DSPPQ9NZW4 1301 aa22.31■■□□□ 1.16
PVT1-219ENST00000523427 ANP32DO95626 131 aa22.31■■□□□ 1.16
PVT1-219ENST00000523427 SAGP10523 405 aaPredicted RBP22.31■■□□□ 1.16
PVT1-219ENST00000523427 AQP5P55064 265 aa22.31■■□□□ 1.16
PVT1-219ENST00000523427 GKAP1Q5VSY0 366 aaPredicted RBP22.31■■□□□ 1.16
PVT1-219ENST00000523427 RNF220Q5VTB9 566 aa22.31■■□□□ 1.16
PVT1-219ENST00000523427 FAHD2BQ6P2I3 314 aaPredicted RBP22.31■■□□□ 1.16
PVT1-219ENST00000523427 ANKK1Q8NFD2 765 aa22.31■■□□□ 1.16
PVT1-219ENST00000523427 ZNF418Q8TF45 676 aaPredicted RBP22.31■■□□□ 1.16
PVT1-219ENST00000523427 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.31■■□□□ 1.16
PVT1-219ENST00000523427 FAHD2AQ96GK7 314 aa22.31■■□□□ 1.16
PVT1-219ENST00000523427 TMEM19Q96HH6 336 aa22.31■■□□□ 1.16
PVT1-219ENST00000523427 LRRC37BQ96QE4 947 aa22.31■■□□□ 1.16
PVT1-219ENST00000523427 OR2M2Q96R28 347 aa22.31■■□□□ 1.16
PVT1-219ENST00000523427 EMC6Q9BV81 110 aa22.31■■□□□ 1.16
PVT1-219ENST00000523427 SPATA9Q9BWV2 254 aa22.31■■□□□ 1.16
PVT1-219ENST00000523427 ARMC7Q9H6L4 198 aa22.31■■□□□ 1.16
PVT1-219ENST00000523427 MEAF6Q9HAF1 191 aa22.31■■□□□ 1.16
PVT1-219ENST00000523427 A0A0A6YYJ9 748 aa22.3■■□□□ 1.16
PVT1-219ENST00000523427 ZNF99A8MXY4 864 aaPredicted RBP22.3■■□□□ 1.16
PVT1-219ENST00000523427 SLCO1B7G3V0H7 640 aa22.3■■□□□ 1.16
PVT1-219ENST00000523427 MSMBP08118 114 aa22.3■■□□□ 1.16
PVT1-219ENST00000523427 GRPRP30550 384 aa22.3■■□□□ 1.16
PVT1-219ENST00000523427 MVDP53602 400 aa22.3■■□□□ 1.16
PVT1-219ENST00000523427 TRMT5Q32P41 509 aaKnown RBP22.3■■□□□ 1.16
PVT1-219ENST00000523427 GTDC1Q4AE62 458 aa22.3■■□□□ 1.16
PVT1-219ENST00000523427 ZNF311Q5JNZ3 666 aa22.3■■□□□ 1.16
PVT1-219ENST00000523427 LRP11Q86VZ4 500 aa22.3■■□□□ 1.16
PVT1-219ENST00000523427 TAAR8Q969N4 342 aa22.3■■□□□ 1.16
PVT1-219ENST00000523427 ZBTB9Q96C00 473 aa22.3■■□□□ 1.16
PVT1-219ENST00000523427 MS4A5Q9H3V2 200 aa22.3■■□□□ 1.16
PVT1-219ENST00000523427 SPEF1Q9Y4P9 236 aa22.3■■□□□ 1.16
PVT1-219ENST00000523427 SDHDO14521 159 aa22.29■■□□□ 1.16
PVT1-219ENST00000523427 AIM2O14862 343 aa22.29■■□□□ 1.16
PVT1-219ENST00000523427 BIRC5O15392 142 aa22.29■■□□□ 1.16
PVT1-219ENST00000523427 PPIHO43447 177 aaKnown RBP22.29■■□□□ 1.16
PVT1-219ENST00000523427 LRRC74AQ0VAA2 488 aa22.29■■□□□ 1.16
PVT1-219ENST00000523427 STX3Q13277 289 aa22.29■■□□□ 1.16
PVT1-219ENST00000523427 GSG1Q2KHT4 349 aa22.29■■□□□ 1.16
PVT1-219ENST00000523427 ALKBH6Q3KRA9 238 aa22.29■■□□□ 1.16
PVT1-219ENST00000523427 OGFOD2Q6N063 350 aa22.29■■□□□ 1.16
PVT1-219ENST00000523427 ZNF813Q6ZN06 617 aa22.29■■□□□ 1.16
PVT1-219ENST00000523427 CCDC36Q8IYA8 594 aa22.29■■□□□ 1.16
PVT1-219ENST00000523427 RNF217Q8TC41 542 aa22.29■■□□□ 1.16
PVT1-219ENST00000523427 RDH5Q92781 318 aa22.29■■□□□ 1.16
PVT1-219ENST00000523427 WDR55Q9H6Y2 383 aaPredicted RBP22.29■■□□□ 1.16
PVT1-219ENST00000523427 DUSP13Q9UII6 198 aa22.29■■□□□ 1.16
PVT1-219ENST00000523427 GPR45Q9Y5Y3 372 aa22.29■■□□□ 1.16
PVT1-219ENST00000523427 TMEM247A6NEH6 219 aa22.28■■□□□ 1.16
PVT1-219ENST00000523427 AKAP8O43823 692 aaKnown RBP22.28■■□□□ 1.16
PVT1-219ENST00000523427 NQO1P15559 274 aaKnown RBP22.28■■□□□ 1.16
PVT1-219ENST00000523427 PTDSS1P48651 473 aaKnown RBP22.28■■□□□ 1.16
PVT1-219ENST00000523427 TMEM123Q8N131 208 aa22.28■■□□□ 1.16
PVT1-219ENST00000523427 ZFAND2BQ8WV99 257 aa22.28■■□□□ 1.16
PVT1-219ENST00000523427 YIPF5Q969M3 257 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms