RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 STX11O75558 287 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 PPIAL4GP0DN37 164 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 CD79AP11912 226 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 SDC1P18827 310 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 MAKP20794 623 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 TACR3P29371 465 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 CD80P33681 288 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 MAP2K6P52564 334 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 RPL15P61313 204 aaKnown RBP11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 SEC61A1P61619 476 aaKnown RBP11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 MRPS25P82663 173 aaKnown RBP11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 CALCOCO2Q13137 446 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 TEX35Q5T0J7 233 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 RGS7BPQ6MZT1 257 aaPredicted RBP11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 CCBE1Q6UXH8 406 aaPredicted RBP11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 R3HCC1LQ7Z5L2 792 aaKnown RBP11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 LRRC8AQ8IWT6 810 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 SLC35F6Q8N357 371 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 CCL17Q92583 94 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 ZDHHC16Q969W1 377 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 UPRTQ96BW1 309 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 ELMOD3Q96FG2 381 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 METTL2AQ96IZ6 378 aaKnown RBP11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 FCRL1Q96LA6 429 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 ZNF350Q9GZX5 532 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 EXOSC3Q9NQT5 275 aaKnown RBP11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 DECR2Q9NUI1 292 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 NECAP2Q9NVZ3 263 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 SLC7A8Q9UHI5 535 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 BAIAP2L1Q9UHR4 511 aa11.69□□□□□ -0.54
NKX3-1-202ENST00000523261 TRAV40A0A0B4J280 105 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 A8MXK9 166 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 ZNF99A8MXY4 864 aaPredicted RBP11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 H0YL77 283 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 PIP5K1CO60331 668 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 CHRM4P08173 479 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 ZNF250P15622 560 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 IMPDH1P20839 514 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 SLC6A9P48067 706 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 KLF3P57682 345 aaPredicted RBP11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 PIGFQ07326 219 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 TSTQ16762 297 aaKnown RBP11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 Q6YL49 198 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 ZNF620Q6ZNG0 422 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 GPR137CQ8N3F9 429 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 TMEM86BQ8N661 226 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 ARFGAP2Q8N6H7 521 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 MGARPQ8TDB4 240 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 MTERF3Q96E29 417 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 ACSS3Q9H6R3 686 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 NPHS2Q9NP85 383 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 MID1IP1Q9NPA3 183 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 RRAGDQ9NQL2 400 aaPredicted RBP11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 ADPRHL2Q9NX46 363 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 RCE1Q9Y256 329 aa11.68□□□□□ -0.54
NKX3-1-202ENST00000523261 TANC2Q9HCD6 1990 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 SLC22A23A1A5C7 686 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 SCN2BO60939 215 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 SLC43A1O75387 559 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 UBOX5O94941 541 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 AK1P00568 194 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 MYZAPP0CAP1 466 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 PRPH2P23942 346 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 CLDN17P56750 224 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 SELENOVP59797 346 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 ETF1P62495 437 aaKnown RBP11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 RPS26P62854 115 aaKnown RBP11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 ARHGAP11BQ3KRB8 267 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 SPDYE7PQ495Y7 208 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 SYNPRQ8TBG9 265 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 SFXN5Q8TD22 340 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 OIT3Q8WWZ8 545 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 CNOT9Q92600 299 aaKnown RBP11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 L3HYPDHQ96EM0 354 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 GSTO2Q9H4Y5 243 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 NOX4Q9NPH5 578 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 SLCO1C1Q9NYB5 712 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 ZNF224Q9NZL3 707 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 RASD1Q9Y272 281 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 DOCK11Q5JSL3 2073 aa11.67□□□□□ -0.54
NKX3-1-202ENST00000523261 CLDN24A6NM45 220 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 IGHV2-70P01814 119 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 TAC1P20366 129 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 GIPRP48546 466 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 PTDSS1P48651 473 aaKnown RBP11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 COL10A1Q03692 680 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 SLC3A1Q07837 685 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 FAM153CQ494X1 144 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 OXLD1Q5BKU9 147 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 BRD3OSQ6XYD6 125 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 OR10S1Q8NGN2 331 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 OR5AK3PQ8NH89 298 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 OR5P2Q8WZ92 322 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 ZG16BQ96DA0 208 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 DIRC2Q96SL1 478 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 ERP44Q9BS26 406 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 PATZ1Q9HBE1 687 aaKnown RBP11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 C1orf109Q9NX04 203 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 POMT1Q9Y6A1 747 aa11.66□□□□□ -0.54
NKX3-1-202ENST00000523261 MELTFP08582 738 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms