RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 A0A1B0GWA3 101 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 C5orf58C9J3I9 102 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 CLIC1O00299 241 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 UBDO15205 165 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 SERPINI2O75830 405 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 ZNF432O94892 652 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 CD79AP11912 226 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 HLA-DOBP13765 273 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 TCN1P20061 433 aaPredicted RBP13.35□□□□□ -0.27
MRPS28-209ENST00000522987 NPR2P20594 1047 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 HNF1AP20823 631 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 PPOXP50336 477 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 AQP5P55064 265 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 PIGFQ07326 219 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 SNTB2Q13425 540 aaKnown RBP13.35□□□□□ -0.27
MRPS28-209ENST00000522987 RGNQ15493 299 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 ADRM1Q16186 407 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 GLIPR1L2Q4G1C9 344 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 WDFY1Q8IWB7 410 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 C10orf111Q8N326 155 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 OR4F15Q8NGB8 312 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 C1orf159Q96HA4 380 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 MS4A3Q96HJ5 214 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 OXGR1Q96P68 337 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 OR2M2Q96R28 347 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 PIF1Q9H611 641 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 ARMC7Q9H6L4 198 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 NARFLQ9H6Q4 476 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 NOX3Q9HBY0 568 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 ZIM2Q9NZV7 527 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 IFT52Q9Y366 437 aa13.35□□□□□ -0.27
MRPS28-209ENST00000522987 IGKV1D-42A0A075B6H8 117 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 A0A096LPI6 279 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 TMEM129A0AVI4 362 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 LRRN3E7EW58 273 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 AIM2O14862 343 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 TPST1O60507 370 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 HPRP00739 348 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 IGKV3-15P01624 115 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 HLA-HP01893 362 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 IGFBP1P08833 259 aaPredicted RBP13.34□□□□□ -0.27
MRPS28-209ENST00000522987 ADRA2AP08913 450 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 CBR1P16152 277 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 APEX1P27695 318 aaKnown RBP13.34□□□□□ -0.27
MRPS28-209ENST00000522987 SH3BGRP55822 239 aaPredicted RBP13.34□□□□□ -0.27
MRPS28-209ENST00000522987 DAG1Q14118 895 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 EFNB3Q15768 340 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 MSMPQ1L6U9 139 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 MIER2Q8N344 545 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 BBS10Q8TAM1 723 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 MAGEE2Q8TD90 523 aaPredicted RBP13.34□□□□□ -0.27
MRPS28-209ENST00000522987 CKAP2Q8WWK9 683 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 GTF2H4Q92759 462 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 BOD1Q96IK1 185 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 MAELQ96JY0 434 aaKnown RBP13.34□□□□□ -0.27
MRPS28-209ENST00000522987 DOK1Q99704 481 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 SDR39U1Q9NRG7 319 aaPredicted RBP13.34□□□□□ -0.27
MRPS28-209ENST00000522987 FZR1Q9UM11 496 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 RCE1Q9Y256 329 aa13.34□□□□□ -0.27
MRPS28-209ENST00000522987 TRAF3IP2O43734 574 aaPredicted RBP13.33□□□□□ -0.28
MRPS28-209ENST00000522987 LILRA1O75019 489 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 PDE5AO76074 875 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 IFNGR1P15260 489 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 NQO1P15559 274 aaKnown RBP13.33□□□□□ -0.28
MRPS28-209ENST00000522987 AQP1P29972 269 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 MAGOHP61326 146 aaKnown RBP13.33□□□□□ -0.28
MRPS28-209ENST00000522987 RINLQ6ZS11 566 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 TMEM123Q8N131 208 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 C10orf53Q8N6V4 93 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 NUP37Q8NFH4 326 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 SLC38A4Q969I6 547 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 TXNDC15Q96J42 360 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 SYT3Q9BQG1 590 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 WFDC6Q9BQY6 131 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 MYOZ1Q9NP98 299 aaPredicted RBP13.33□□□□□ -0.28
MRPS28-209ENST00000522987 A4GALTQ9NPC4 353 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 MED29Q9NX70 200 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 SLC25A37Q9NYZ2 338 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 SLAMF8Q9P0V8 285 aa13.33□□□□□ -0.28
MRPS28-209ENST00000522987 SVEP1Q4LDE5 3571 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 MS4A18H0YCH9 400 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 RPL36A-HNRNPH2H7BZ11 118 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 SRP14P37108 136 aaKnown RBP13.32□□□□□ -0.28
MRPS28-209ENST00000522987 POU3F1Q03052 451 aaPredicted RBP13.32□□□□□ -0.28
MRPS28-209ENST00000522987 CAMK2DQ13557 499 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 MAD2L1BPQ15013 274 aaPredicted RBP13.32□□□□□ -0.28
MRPS28-209ENST00000522987 MS4A18Q3C1V0 323 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 ALG10BQ5I7T1 473 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 GCNT6Q5T4J0 391 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 C1QTNF12Q5T7M4 302 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 FAM69AQ5T7M9 428 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 H1FNTQ75WM6 255 aaPredicted RBP13.32□□□□□ -0.28
MRPS28-209ENST00000522987 CARM1Q86X55 608 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 UEVLDQ8IX04 471 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 MSRB3Q8IXL7 192 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 PIK3C3Q8NEB9 887 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 UBASH3BQ8TF42 649 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 MOGAT1Q96PD6 335 aa13.32□□□□□ -0.28
MRPS28-209ENST00000522987 MRPL37Q9BZE1 423 aaKnown RBP13.32□□□□□ -0.28
MRPS28-209ENST00000522987 ZNF442Q9H7R0 627 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms