RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 GPAT4Q86UL3 456 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 C9orf106Q8NAJ2 232 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 ANKK1Q8NFD2 765 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 OR9K2Q8NGE7 335 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 GMPPAQ96IJ6 420 aaPredicted RBP18.7■□□□□ 0.58
LSM6-207ENST00000515311 BCO1Q9HAY6 547 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 KRT84Q9NSB2 600 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 IL20Q9NYY1 176 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 EMC3Q9P0I2 261 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 KLHL13Q9P2N7 655 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 REV1Q9UBZ9 1251 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 TMEFF2Q9UIK5 374 aaPredicted RBP18.7■□□□□ 0.58
LSM6-207ENST00000515311 CDH10Q9Y6N8 788 aa18.7■□□□□ 0.58
LSM6-207ENST00000515311 NPIPB13A6NJU9 1138 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 ZNF724A8MTY0 619 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 NPIPB4C9JG80 1138 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 SOCS2O14508 198 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 GPR171O14626 319 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 RNF13O43567 381 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 ZNF26P17031 533 aaPredicted RBP18.69■□□□□ 0.58
LSM6-207ENST00000515311 AHCYP23526 432 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 IGFBP5P24593 272 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 PEX2P28328 305 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 FXYD6P3P58550 94 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 ALG10Q5BKT4 473 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 OGFRL1Q5TC84 451 aaPredicted RBP18.69■□□□□ 0.58
LSM6-207ENST00000515311 ANKRD34AQ69YU3 496 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 KIF18BQ86Y91 864 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 MCEMP1Q8IX19 187 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 RPRMLQ8N4K4 120 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 MOSPD2Q8NHP6 518 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 DMRTA2Q96SC8 542 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 GPX7Q96SL4 187 aaPredicted RBP18.69■□□□□ 0.58
LSM6-207ENST00000515311 OR52D1Q9H346 318 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 ENOPH1Q9UHY7 261 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 SH3BGRL2Q9UJC5 107 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 ING1Q9UK53 422 aaPredicted RBP18.69■□□□□ 0.58
LSM6-207ENST00000515311 MEMO1Q9Y316 297 aa18.69■□□□□ 0.58
LSM6-207ENST00000515311 SS18L1O75177 396 aaPredicted RBP18.68■□□□□ 0.58
LSM6-207ENST00000515311 TP53P04637 393 aaPredicted RBP18.68■□□□□ 0.58
LSM6-207ENST00000515311 CRHP06850 196 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 OSMP13725 252 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 ZNF43P17038 809 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 GNLYP22749 145 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 CEACAM8P31997 349 aaPredicted RBP18.68■□□□□ 0.58
LSM6-207ENST00000515311 IL1RL1Q01638 556 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 C1DQ13901 141 aaKnown RBP18.68■□□□□ 0.58
LSM6-207ENST00000515311 GUSBP1Q15486 140 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 RFX4Q33E94 735 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 LPCAT4Q643R3 524 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 TMEM211Q6ICI0 200 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 NHLRC1Q6VVB1 395 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 UEVLDQ8IX04 471 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 KDM8Q8N371 416 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 PACRGLQ8N7B6 248 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 LRRC75AQ8NAA5 344 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 INIPQ9NRY2 104 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 ESPL1Q14674 2120 aa18.68■□□□□ 0.58
LSM6-207ENST00000515311 A0A1B0GUH1 482 aa18.67■□□□□ 0.58
LSM6-207ENST00000515311 C11orf98E9PRG8 122 aa18.67■□□□□ 0.58
LSM6-207ENST00000515311 TRAF3IP2O43734 574 aaPredicted RBP18.67■□□□□ 0.58
LSM6-207ENST00000515311 TOXO94900 526 aa18.67■□□□□ 0.58
LSM6-207ENST00000515311 PLGP00747 810 aaPredicted RBP18.67■□□□□ 0.58
LSM6-207ENST00000515311 IL2RAP01589 272 aa18.67■□□□□ 0.58
LSM6-207ENST00000515311 YES1P07947 543 aa18.67■□□□□ 0.58
LSM6-207ENST00000515311 SLC6A6P31641 620 aa18.67■□□□□ 0.58
LSM6-207ENST00000515311 POU3F1Q03052 451 aaPredicted RBP18.67■□□□□ 0.58
LSM6-207ENST00000515311 RIPPLY2Q5TAB7 128 aa18.67■□□□□ 0.58
LSM6-207ENST00000515311 THSD4Q6ZMP0 1018 aa18.67■□□□□ 0.58
LSM6-207ENST00000515311 CREB3L2Q70SY1 520 aa18.67■□□□□ 0.58
LSM6-207ENST00000515311 MARVELD2Q8N4S9 558 aa18.67■□□□□ 0.58
LSM6-207ENST00000515311 MAGEE2Q8TD90 523 aaPredicted RBP18.67■□□□□ 0.58
LSM6-207ENST00000515311 SLC29A1Q99808 456 aa18.67■□□□□ 0.58
LSM6-207ENST00000515311 EGLN3Q9H6Z9 239 aa18.67■□□□□ 0.58
LSM6-207ENST00000515311 ORC6Q9Y5N6 252 aa18.67■□□□□ 0.58
LSM6-207ENST00000515311 FLVCR1Q9Y5Y0 555 aa18.67■□□□□ 0.58
LSM6-207ENST00000515311 A0A1W2PRG6 482 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 MCIDASD6RGH6 385 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 SOX14O95416 240 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 IGHMP01871 453 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 F13BP05160 661 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 CD14P08571 375 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 AGTR1P30556 359 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 RPL4P36578 427 aaKnown RBP18.66■□□□□ 0.58
LSM6-207ENST00000515311 UQCRFS1P47985 274 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 DAP3P51398 398 aaKnown RBP18.66■□□□□ 0.58
LSM6-207ENST00000515311 RAD23AP54725 363 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 PER3P56645 1201 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 ESRRGP62508 458 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 PMPCAQ10713 525 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 LRRC36Q1X8D7 754 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 SLC36A3Q495N2 470 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 DPY19L2P2Q6ZN68 376 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 ZIC4Q8N9L1 334 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 OR52L1Q8NGH7 329 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 TEX47Q8TBZ9 253 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 TMEM45BQ96B21 275 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 SAMD8Q96LT4 415 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 ENKD1Q9H0I2 346 aa18.66■□□□□ 0.58
LSM6-207ENST00000515311 NRIP3Q9NQ35 241 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms