RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ZNF699Q32M78 642 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 RFTN2Q52LD8 501 aaPredicted RBP2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 PYCR3Q53H96 274 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 TFDP3Q5H9I0 405 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 TEX35Q5T0J7 233 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 C1orf185Q5T7R7 199 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 C1orf189Q5VU69 101 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 CLEC2AQ6UVW9 174 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 C17orf64Q86WR6 236 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 SERPINA12Q8IW75 414 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 PEX5LQ8IYB4 626 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 ABHD12Q8N2K0 398 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 MDS2Q8NDY4 140 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 OR2AP1Q8NGE2 309 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 SPPL2AQ8TCT8 520 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 NPRL2Q8WTW4 380 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 UBTD2Q8WUN7 234 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 ISG20Q96AZ6 181 aaKnown RBP2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 S1PR3Q99500 378 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 ATF6BQ99941 703 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 HES7Q9BYE0 225 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 MARCH7Q9H992 704 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 KCNK13Q9HB14 408 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 PLEKHA3Q9HB20 300 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 PARVGQ9HBI0 331 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 UBE2TQ9NPD8 197 aaPredicted RBP2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 FAM212BQ9NTI7 297 aaPredicted RBP2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 MED17Q9NVC6 651 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 ANO10Q9NW15 660 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 DHCR7Q9UBM7 475 aaKnown RBP2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 TRIM10Q9UDY6 481 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 HMGXB4Q9UGU5 601 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 NXT1Q9UKK6 140 aaKnown RBP2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 TSPAN16Q9UKR8 245 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 EXOC7Q9UPT5 735 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 SH3GLB1Q9Y371 365 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 IKBKGQ9Y6K9 419 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 AP1M2Q9Y6Q5 423 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 PHF3Q92576 2039 aaKnown RBP2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 DOCK10Q96BY6 2186 aa2.81□□□□□ -1.96
TOPBP1-208ENST00000511439 TRBV5-4A0A0C4DH59 114 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 SLC5A10A0PJK1 596 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 GOLGA8IPA6NC78 632 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 CCT8L1PA6NM43 557 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 GOLGA8JA6NMD2 632 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 DEFB108AA8MXU0 73 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 NPIPA2E9PIF3 369 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 TGM6O95932 706 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 CALCAP01258 141 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 IGHV3-13P01766 116 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 SLC4A1P02730 911 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 LYNP07948 512 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 TPM2P07951 284 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 FERP16591 822 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 SHC1P29353 583 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 CCR8P51685 355 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 EFNA3P52797 238 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 NDUFV3P56181 108 aaKnown RBP2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 VSX2P58304 361 aaPredicted RBP2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 MYL6P60660 151 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 CD300CQ08708 224 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 ADIGQ0VDE8 80 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 MSLNQ13421 630 aaPredicted RBP2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 NKAIN1Q4KMZ8 207 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 CMPK2Q5EBM0 449 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 FAM182AQ5T1J6 154 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 RTL6Q6ICC9 239 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 RHBDD2Q6NTF9 364 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 NEPROQ6NW34 567 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 CDHR3Q6ZTQ4 885 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 NDUFAF7Q7L592 441 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 ADCK1Q86TW2 530 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 STHQ8IWL8 128 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 ATP6V0D2Q8N8Y2 350 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 CCDC197Q8NCU1 140 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 C17orf47Q8NEP4 570 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 OR6F1Q8NGZ6 308 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 N4BP2L2Q92802 583 aaPredicted RBP2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 NTNG2Q96CW9 530 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 NUS1Q96E22 293 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 TCEANC2Q96MN5 208 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 COL21A1Q96P44 957 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 LYSTQ99698 3801 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 AGPAT1Q99943 283 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 UTP23Q9BRU9 249 aaKnown RBP2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 CHCHD5Q9BSY4 110 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 RSPO3Q9BXY4 272 aaPredicted RBP2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 RAB34Q9BZG1 259 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 METTL17Q9H7H0 456 aaPredicted RBP2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 WDR41Q9HAD4 459 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 GNB4Q9HAV0 340 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 ZNF629Q9UEG4 869 aaPredicted RBP2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 DSCAMO60469 2012 aa2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 RAI1Q7Z5J4 1906 aaPredicted RBP2.8□□□□□ -1.96
TOPBP1-208ENST00000511439 CPAMD8Q8IZJ3 1885 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 ABCA13Q86UQ4 5058 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 STAB2Q8WWQ8 2551 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 CXorf51AA0A1B0GTR3 108 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 TSPAN11A1L157 253 aa2.79□□□□□ -1.96
TOPBP1-208ENST00000511439 GSAPA4D1B5 854 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms