RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 MUCL1Q96DR8 90 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 NSL1Q96IY1 281 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 TXNDC15Q96J42 360 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 PRRC1Q96M27 445 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 ZNF426Q9BUY5 554 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 EMC6Q9BV81 110 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 C1QTNF6Q9BXI9 259 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 MEPEQ9NQ76 525 aaPredicted RBP12.29□□□□□ -0.44
DDX41-212ENST00000511040 C20orf141Q9NUB4 165 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 CCM2LQ9NUG4 571 aaPredicted RBP12.29□□□□□ -0.44
DDX41-212ENST00000511040 MED29Q9NX70 200 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 A4GNTQ9UNA3 340 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 AKAP9Q99996 3911 aa12.29□□□□□ -0.44
DDX41-212ENST00000511040 ZNF587BE7ETH6 402 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 GMNNO75496 209 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 ZNF432O94892 652 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 OR6A2O95222 327 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 ATE1O95260 518 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 MT-ATP6P00846 226 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 HIST1H2ABP04908 130 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 ADORA3P0DMS8 318 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 DNASE1P24855 282 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 MPGP29372 298 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 LSM11P83369 360 aaKnown RBP eCLIP12.28□□□□□ -0.44
DDX41-212ENST00000511040 PUDPQ08623 228 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 SAMD4BQ5PRF9 694 aaKnown RBP12.28□□□□□ -0.44
DDX41-212ENST00000511040 TIMM23BQ5SRD1 257 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 C16orf89Q6UX73 402 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 ZNF704Q6ZNC4 412 aaPredicted RBP12.28□□□□□ -0.44
DDX41-212ENST00000511040 HIST3H2AQ7L7L0 130 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 SLC46A3Q7Z3Q1 461 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 FAM86B1Q8N7N1 296 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 TMEM239Q8WW34 195 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 HIST1H2ACQ93077 130 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 OR2M2Q96R28 347 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 FNDC11Q9BVV2 318 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 SLC19A3Q9BZV2 496 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 POLR2J2Q9GZM3 115 aaKnown RBP12.28□□□□□ -0.44
DDX41-212ENST00000511040 POLR2J3Q9H1A7 115 aaKnown RBP12.28□□□□□ -0.44
DDX41-212ENST00000511040 FKRPQ9H9S5 495 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 NANSQ9NR45 359 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 NPAP1Q9NZP6 1156 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 ANKRD17O75179 2603 aaKnown RBP12.28□□□□□ -0.44
DDX41-212ENST00000511040 CSMD1Q96PZ7 3565 aa12.28□□□□□ -0.44
DDX41-212ENST00000511040 LOC102725191A0A1B0GVB3 256 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 DPRXA6NFQ7 191 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 B2RBV5 119 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 FFAR1O14842 300 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 CLOCKO15516 846 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 SLC43A1O75387 559 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 OR7A10O76100 309 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 MT-ND1P03886 318 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 RAF1P04049 648 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 HSD17B1P14061 328 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 RBM34P42696 430 aaKnown RBP12.27□□□□□ -0.45
DDX41-212ENST00000511040 ZNF83P51522 516 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 ART1P52961 327 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 NR1H2P55055 460 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 ROR2Q01974 943 aaKnown RBP12.27□□□□□ -0.45
DDX41-212ENST00000511040 BSPH1Q075Z2 132 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 KEAP1Q14145 624 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 HIKESHIQ53FT3 197 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 PHYHD1Q5SRE7 291 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 NHLRC1Q6VVB1 395 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 WDR31Q8NA23 367 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 NEUROG1Q92886 237 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 SGTBQ96EQ0 304 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 MUS81Q96NY9 551 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 USB1Q9BQ65 265 aaKnown RBP12.27□□□□□ -0.45
DDX41-212ENST00000511040 TAS2R5Q9NYW4 299 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 CD300AQ9UGN4 299 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 ZNF229Q9UJW7 825 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 RPS6KA6Q9UK32 745 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 RCE1Q9Y256 329 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 MED31Q9Y3C7 131 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 NOX1Q9Y5S8 564 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 SLC25A15Q9Y619 301 aa12.27□□□□□ -0.45
DDX41-212ENST00000511040 SLC35F4A4IF30 521 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 BLOC1S5-TXNDC5H3BN57 136 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 M0R3G1 203 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 RNF13O43567 381 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 AKAP8O43823 692 aaKnown RBP12.26□□□□□ -0.45
DDX41-212ENST00000511040 CD3EP07766 207 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 ASAH2BP0C7U1 165 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 THRBP10828 461 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 IFNGR1P15260 489 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 FUT1P19526 365 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 TGFBR3Q03167 851 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 ST3GAL3Q11203 375 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 CAMK2DQ13557 499 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 TRAM2Q15035 370 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 NCMAPQ5T1S8 102 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 OR7E24Q6IFN5 339 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 HMBOX1Q6NT76 420 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 RINLQ6ZS11 566 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 NANOGNBQ7Z5D8 188 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 ABHD12BQ7Z5M8 362 aaPredicted RBP12.26□□□□□ -0.45
DDX41-212ENST00000511040 TSEN54Q7Z6J9 526 aaKnown RBP12.26□□□□□ -0.45
DDX41-212ENST00000511040 PXKQ7Z7A4 578 aa12.26□□□□□ -0.45
DDX41-212ENST00000511040 P2RY8Q86VZ1 359 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms