RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 REP15Q6BDI9 236 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 NANOGP8Q6NSW7 305 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 HMBOX1Q6NT76 420 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 C5orf46Q6UWT4 87 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 H1FNTQ75WM6 255 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 NET1Q7Z628 596 aaPredicted RBP12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 OR4D11Q8NGI4 311 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 OR6T1Q8NGN1 323 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 TSPEARQ8WU66 669 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 TAMM41Q96BW9 452 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 KCTD12Q96CX2 325 aaKnown RBP12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 MOGAT1Q96PD6 335 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 EPYCQ99645 322 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 NANOGQ9H9S0 305 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 MOKQ9UQ07 419 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 PLCE1Q9P212 2302 aa12.95□□□□□ -0.34
UBE2D3-228ENST00000508974 LOC100653049A0A140TA62 436 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 RNF223E7ERA6 249 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 KPNA4O00629 521 aaPredicted RBP12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 KRT34O76011 436 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 BGLAPP02818 100 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 CD247P20963 164 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 UBE2NP61088 152 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 POU3F1Q03052 451 aaPredicted RBP12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 PMS2P3Q13401 168 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 CYLC2Q14093 348 aaPredicted RBP12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 NRF1Q16656 503 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 VMACQ2NL98 169 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 AGAP6Q5VW22 663 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 PATL1Q86TB9 770 aaKnown RBP12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 SNX32Q86XE0 403 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 UEVLDQ8IX04 471 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 FBXL14Q8N1E6 418 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 GPR137CQ8N3F9 429 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 HS6ST2Q96MM7 605 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 DHRS9Q9BPW9 319 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 EMC6Q9BV81 110 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 ASPNQ9BXN1 380 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 CACNG6Q9BXT2 260 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 SAR1AQ9NR31 198 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 B3GALT5Q9Y2C3 310 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 CR1P17927 2039 aa12.94□□□□□ -0.34
UBE2D3-228ENST00000508974 IGHV1-18A0A0C4DH31 117 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 MS4A18H0YCH9 400 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 M0R3G1 203 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 FXYD1O00168 92 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 TRAF3IP2O43734 574 aaPredicted RBP12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 SSX4O60224 188 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 TNFRSF1BP20333 461 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 AHCYP23526 432 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 TTKP33981 857 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 GZMMP51124 257 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 ARF1P84077 181 aaKnown RBP12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 CEACAM16Q2WEN9 425 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 MS4A18Q3C1V0 323 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 PHYHD1Q5SRE7 291 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 WDR88Q6ZMY6 472 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 DTX2Q86UW9 622 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 TSPYL5Q86VY4 417 aaPredicted RBP12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 SLC30A8Q8IWU4 369 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 MUC15Q8N387 334 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 BCL2L2Q92843 193 aaPredicted RBP12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 LRRC58Q96CX6 371 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 ZNF837Q96EG3 531 aaPredicted RBP12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 OR2M2Q96R28 347 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 ECSITQ9BQ95 431 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 LINC00470Q9BZP3 86 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 FKRPQ9H9S5 495 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 GPR35Q9HC97 309 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 MED29Q9NX70 200 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 ARMCX1Q9P291 453 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 SLC7A7Q9UM01 511 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 RCE1Q9Y256 329 aa12.93□□□□□ -0.34
UBE2D3-228ENST00000508974 OR6C65A6NJZ3 312 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 FAM171A2A8MVW0 826 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 C11orf98E9PRG8 122 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 CHP2O43745 196 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 SHOX2O60902 331 aaPredicted RBP12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 ZNF432O94892 652 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 THY1P04216 161 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 C8BP07358 591 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 PCSK6P29122 969 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 CAPZA2P47755 286 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 CRYBA2P53672 197 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 HSP90B2PQ58FF3 399 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 SWT1Q5T5J6 900 aaKnown RBP12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 INTS11Q5TA45 600 aaKnown RBP12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 C11orf71Q6IPW1 123 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 ZNF613Q6PF04 617 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 WDFY1Q8IWB7 410 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 POU5F2Q8N7G0 328 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 PIK3C3Q8NEB9 887 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 ADAMTS16Q8TE57 1224 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 TXNDC15Q96J42 360 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 SLC38A2Q96QD8 506 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 KCNS3Q9BQ31 491 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 TMEM43Q9BTV4 400 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 NELFAQ9H3P2 528 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 EVA1AQ9H8M9 152 aa12.92□□□□□ -0.34
UBE2D3-228ENST00000508974 SEC61A2Q9H9S3 476 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms