RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 ERCC1P07992 297 aaPredicted RBP3.12□□□□□ -1.91
DHFR-204ENST00000508282 CD55P08174 381 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 STSP08842 583 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 CCDC172P0C7W6 258 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 RSPH10BP0C881 870 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 PSG2P11465 335 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 PRKACAP17612 351 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 MSR1P21757 451 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 ATP5C1P36542 298 aaKnown RBP3.12□□□□□ -1.91
DHFR-204ENST00000508282 MAP3K8P41279 467 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 ACLYP53396 1101 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 CRYBB1P53674 252 aaPredicted RBP3.12□□□□□ -1.91
DHFR-204ENST00000508282 HSPA2P54652 639 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 RND3P61587 244 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 CDK16Q00536 496 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 EGFEM1PQ0D2K5 195 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 ST3GAL3Q11203 375 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 ASPHQ12797 758 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 ZNF154Q13106 437 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 STK11Q15831 433 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 TRIM16LQ309B1 348 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 TIGITQ495A1 244 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 FBXO48Q5FWF7 155 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 C1orf220Q5T0J3 134 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 PLCXD3Q63HM9 321 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 SLC8B1Q6J4K2 584 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 LRRC31Q6UY01 552 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 C19orf35Q6ZS72 473 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 ZNF433Q8N7K0 673 aaPredicted RBP3.12□□□□□ -1.91
DHFR-204ENST00000508282 OR2T33Q8NG76 320 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 OR8K3Q8NH51 312 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 LRRC39Q96DD0 335 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 LZTFL1Q9NQ48 299 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 TBC1D24Q9ULP9 559 aa3.12□□□□□ -1.91
DHFR-204ENST00000508282 IQANK1A0A1B0GTG1 560 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.11□□□□□ -1.91
DHFR-204ENST00000508282 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.11□□□□□ -1.91
DHFR-204ENST00000508282 SAGE2PA6NJ88 616 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 A8MXQ7 604 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 E7ESA3 106 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 CLOCKO15516 846 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 CXCL13O43927 109 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 TMEM50AO95807 157 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 IGHG4P01861 327 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 GAPDHP04406 335 aaKnown RBP3.11□□□□□ -1.91
DHFR-204ENST00000508282 P04436 131 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 SERPIND1P05546 499 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 CCNB1P14635 433 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 EIF2S2P20042 333 aaKnown RBP3.11□□□□□ -1.91
DHFR-204ENST00000508282 KITLGP21583 273 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 NAMPTP43490 491 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 RPS5P46782 204 aaKnown RBP3.11□□□□□ -1.91
DHFR-204ENST00000508282 QARSP47897 775 aaKnown RBP3.11□□□□□ -1.91
DHFR-204ENST00000508282 CSNK1EP49674 416 aaKnown RBP3.11□□□□□ -1.91
DHFR-204ENST00000508282 CUL1Q13616 776 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 VPS26BQ4G0F5 336 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 HIKESHIQ53FT3 197 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 AGBL2Q5U5Z8 902 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 PVRIGQ6DKI7 326 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 TMEM220Q6QAJ8 160 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 LRRC74BQ6ZQY2 392 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 SCD5Q86SK9 330 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 GABRG1Q8N1C3 465 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 CCDC71LQ8N9Z2 235 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 OR9A4Q8NGU2 314 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 GLYATL2Q8WU03 294 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 TCTEX1D2Q8WW35 142 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 MRPS31Q92665 395 aaKnown RBP3.11□□□□□ -1.91
DHFR-204ENST00000508282 NEIL2Q969S2 332 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 KIAA1143Q96AT1 154 aaPredicted RBP3.11□□□□□ -1.91
DHFR-204ENST00000508282 PLEKHA8Q96JA3 519 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 ZNF641Q96N77 438 aaPredicted RBP3.11□□□□□ -1.91
DHFR-204ENST00000508282 PANX2Q96RD6 677 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 CNN2Q99439 309 aaKnown RBP3.11□□□□□ -1.91
DHFR-204ENST00000508282 NAT10Q9H0A0 1025 aaKnown RBP3.11□□□□□ -1.91
DHFR-204ENST00000508282 PPA2Q9H2U2 334 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 PPDPFQ9H3Y8 114 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 RGCCQ9H4X1 137 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 HAUS4Q9H6D7 363 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 SMYD3Q9H7B4 428 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 NANOGQ9H9S0 305 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 CYP3A43Q9HB55 503 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 NUDT15Q9NV35 164 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 WRAP73Q9P2S5 460 aaPredicted RBP3.11□□□□□ -1.91
DHFR-204ENST00000508282 SPRR3Q9UBC9 169 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 NUP50Q9UKX7 468 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 COPS3Q9UNS2 423 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 INSRP06213 1382 aa3.11□□□□□ -1.91
DHFR-204ENST00000508282 NDUFS8O00217 210 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 DLGAP1O14490 977 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 TRDMT1O14717 391 aaKnown RBP3.1□□□□□ -1.91
DHFR-204ENST00000508282 PSTPIP1O43586 416 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 CHMP2AO43633 222 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 OR10H3O60404 316 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 CA11O75493 328 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 OR2J3O76001 311 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 OR2F2O95006 317 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 PAHP00439 452 aa3.1□□□□□ -1.91
DHFR-204ENST00000508282 CSTAP01040 98 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms