RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 MFSD13AQ14CX5 517 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 MS4A18Q3C1V0 323 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 CYBRD1Q53TN4 286 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 Q5PR19 223 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 SLC22A25Q6T423 547 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 SEZ6L2Q6UXD5 910 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 WDR88Q6ZMY6 472 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 TUBA1AQ71U36 451 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 ARPINQ7Z6K5 226 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 TSPYL5Q86VY4 417 aaPredicted RBP8.24□□□□□ -1.09
DDX41-209ENST00000508279 GPR137CQ8N3F9 429 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 SLC41A3Q96GZ6 507 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 RADILQ96JH8 1075 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 MUS81Q96NY9 551 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 TMEM43Q9BTV4 400 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 SLC17A5Q9NRA2 495 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 B3GAT1Q9P2W7 334 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 B3GALT5Q9Y2C3 310 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 CORINQ9Y5Q5 1042 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 SLC25A15Q9Y619 301 aa8.24□□□□□ -1.09
DDX41-209ENST00000508279 PDLIM1O00151 329 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 ARHGEF9O43307 516 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 SEC14L2O76054 403 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 WNT11O96014 354 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 THY1P04216 161 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 HIST1H2ABP04908 130 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 YAP1P46937 504 aaKnown RBP8.23□□□□□ -1.09
DDX41-209ENST00000508279 CAPZA2P47755 286 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 PRPS1P60891 318 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 UBE2NP61088 152 aaKnown RBP8.23□□□□□ -1.09
DDX41-209ENST00000508279 SLC25A3Q00325 362 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 PUDPQ08623 228 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 PIN1Q13526 163 aaPredicted RBP8.23□□□□□ -1.09
DDX41-209ENST00000508279 CAMK2DQ13557 499 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 ZNF672Q499Z4 452 aaPredicted RBP8.23□□□□□ -1.09
DDX41-209ENST00000508279 SWT1Q5T5J6 900 aaKnown RBP8.23□□□□□ -1.09
DDX41-209ENST00000508279 TMEM108Q6UXF1 575 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 HIST3H2AQ7L7L0 130 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 LINGO2Q7L985 606 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 SLC15A3Q8IY34 581 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 DEPDC4Q8N2C3 294 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 LRRC17Q8N6Y2 441 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 ZNF611Q8N823 705 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 WDR31Q8NA23 367 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 OR1K1Q8NGR3 316 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 OR5J2Q8NH18 312 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 LILRB1Q8NHL6 650 aaPredicted RBP8.23□□□□□ -1.09
DDX41-209ENST00000508279 SMAP2Q8WU79 429 aaPredicted RBP8.23□□□□□ -1.09
DDX41-209ENST00000508279 LZICQ8WZA0 190 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 HIST1H2ACQ93077 130 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 GTPBP3Q969Y2 492 aaKnown RBP8.23□□□□□ -1.09
DDX41-209ENST00000508279 FAM162AQ96A26 154 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 CMTM5Q96DZ9 223 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 TXNDC15Q96J42 360 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 TMEM204Q9BSN7 226 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 ALG2Q9H553 416 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 CXorf56Q9H5V9 222 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 NANSQ9NR45 359 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 MED29Q9NX70 200 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 CISD1Q9NZ45 108 aaKnown RBP8.23□□□□□ -1.09
DDX41-209ENST00000508279 AMDHD2Q9Y303 409 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 ATP23Q9Y6H3 246 aa8.23□□□□□ -1.09
DDX41-209ENST00000508279 SLC35F4A4IF30 521 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 OR6C65A6NJZ3 312 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 ZNF726A6NNF4 738 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 SHISA9B4DS77 424 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 BLOC1S5-TXNDC5H3BN57 136 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 CXCR6O00574 342 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 NME4O00746 187 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 PLPP3O14495 311 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 RNF13O43567 381 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 TRAF3IP2O43734 574 aaPredicted RBP8.22□□□□□ -1.09
DDX41-209ENST00000508279 SNX3O60493 162 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 ZNF432O94892 652 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 LYPD3O95274 346 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 MT-ATP6P00846 226 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 SOD3P08294 240 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 NCK1P16333 377 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 PTAFRP25105 342 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 CD40P25942 277 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 CDKN1AP38936 164 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 PTH2RP49190 550 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 GSK3BP49841 420 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 BIDP55957 195 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 ATP5J2P56134 94 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 PSME3P61289 254 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 RPS4XP62701 263 aaKnown RBP8.22□□□□□ -1.09
DDX41-209ENST00000508279 ARF1P84077 181 aaKnown RBP8.22□□□□□ -1.09
DDX41-209ENST00000508279 MELKQ14680 651 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 ZNF74Q16587 644 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 CEACAM16Q2WEN9 425 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 TBRG1Q3YBR2 411 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 SHEQ5VZ18 495 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 LINC00114Q6XXX2 140 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 FKBP9P1Q75LS8 142 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 SSX8Q7RTT4 187 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 NANOGNBQ7Z5D8 188 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 YTHDF3Q7Z739 585 aaKnown RBP8.22□□□□□ -1.09
DDX41-209ENST00000508279 VTCN1Q7Z7D3 282 aa8.22□□□□□ -1.09
DDX41-209ENST00000508279 NKAIN4Q8IVV8 208 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms