RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 HPRP00739 348 aa12.45□□□□□ -0.42
RAB28-205ENST00000508274 BGLAPP02818 100 aa12.45□□□□□ -0.42
RAB28-205ENST00000508274 CDH12P55289 794 aa12.45□□□□□ -0.42
RAB28-205ENST00000508274 C1DQ13901 141 aaKnown RBP12.45□□□□□ -0.42
RAB28-205ENST00000508274 NPTX1Q15818 432 aa12.45□□□□□ -0.42
RAB28-205ENST00000508274 NRF1Q16656 503 aa12.45□□□□□ -0.42
RAB28-205ENST00000508274 HMBOX1Q6NT76 420 aa12.45□□□□□ -0.42
RAB28-205ENST00000508274 ZNF544Q6NX49 715 aa12.45□□□□□ -0.42
RAB28-205ENST00000508274 H1FNTQ75WM6 255 aaPredicted RBP12.45□□□□□ -0.42
RAB28-205ENST00000508274 PRIMA1Q86XR5 153 aa12.45□□□□□ -0.42
RAB28-205ENST00000508274 WDFY1Q8IWB7 410 aa12.45□□□□□ -0.42
RAB28-205ENST00000508274 OR4D11Q8NGI4 311 aa12.45□□□□□ -0.42
RAB28-205ENST00000508274 TMEM120AQ9BXJ8 343 aa12.45□□□□□ -0.42
RAB28-205ENST00000508274 KAT8Q9H7Z6 458 aaKnown RBP12.45□□□□□ -0.42
RAB28-205ENST00000508274 FKRPQ9H9S5 495 aa12.45□□□□□ -0.42
RAB28-205ENST00000508274 TMEM27Q9HBJ8 222 aa12.45□□□□□ -0.42
RAB28-205ENST00000508274 SLC13A4Q9UKG4 626 aa12.45□□□□□ -0.42
RAB28-205ENST00000508274 IGHV4-30-2A0A087WSY4 118 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 ZNF503-AS2A6NEH8 195 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 OR6C65A6NJZ3 312 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 MS4A18H0YCH9 400 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 M0QX08 132 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 SEC14L2O76054 403 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 NQO1P15559 274 aaKnown RBP12.44□□□□□ -0.42
RAB28-205ENST00000508274 NUDT6P53370 316 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 UBE2NP61088 152 aaKnown RBP12.44□□□□□ -0.42
RAB28-205ENST00000508274 MS4A18Q3C1V0 323 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 PHYHD1Q5SRE7 291 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 WDR88Q6ZMY6 472 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 NET1Q7Z628 596 aaPredicted RBP12.44□□□□□ -0.42
RAB28-205ENST00000508274 MYPOPQ86VE0 399 aaPredicted RBP12.44□□□□□ -0.42
RAB28-205ENST00000508274 RANBP3LQ86VV4 465 aaPredicted RBP12.44□□□□□ -0.42
RAB28-205ENST00000508274 RBM45Q8IUH3 476 aaKnown RBP12.44□□□□□ -0.42
RAB28-205ENST00000508274 BHLHE22Q8NFJ8 381 aaPredicted RBP12.44□□□□□ -0.42
RAB28-205ENST00000508274 OR10A6Q8NH74 314 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 SLC41A3Q96GZ6 507 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 ADAD1Q96M93 576 aaKnown RBP12.44□□□□□ -0.42
RAB28-205ENST00000508274 SLC38A2Q96QD8 506 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 OR2M2Q96R28 347 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 MCHR1Q99705 422 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 ARHGDIGQ99819 225 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 BARX1Q9HBU1 254 aaPredicted RBP12.44□□□□□ -0.42
RAB28-205ENST00000508274 OBP2BQ9NPH6 170 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 SELENONQ9NZV5 590 aa12.44□□□□□ -0.42
RAB28-205ENST00000508274 CHD3Q12873 2000 aaKnown RBP12.44□□□□□ -0.42
RAB28-205ENST00000508274 ARPC4-TTLL3A0A0A6YYG9 625 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 CPSF4LA6NMK7 179 aaKnown RBP12.43□□□□□ -0.42
RAB28-205ENST00000508274 SLC43A1O75387 559 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 CELA3BP08861 270 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 CECR9P0C854 216 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 CRYBA2P53672 197 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 ARF1P84077 181 aaKnown RBP12.43□□□□□ -0.42
RAB28-205ENST00000508274 PPP2R2BQ00005 443 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 RBBP4Q09028 425 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 CEACAM16Q2WEN9 425 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 CARD17Q5XLA6 110 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 ANKRD16Q6P6B7 361 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 TSPYL5Q86VY4 417 aaPredicted RBP12.43□□□□□ -0.42
RAB28-205ENST00000508274 TMEM123Q8N131 208 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 ZNF525Q8N782 197 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 ADPRHL1Q8NDY3 354 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 OR6T1Q8NGN1 323 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 VANGL1Q8TAA9 524 aaPredicted RBP12.43□□□□□ -0.42
RAB28-205ENST00000508274 TAMM41Q96BW9 452 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 EMC6Q9BV81 110 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 CRLF2Q9HC73 371 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 GPR35Q9HC97 309 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 MED29Q9NX70 200 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 YLPM1P49750 1951 aaKnown RBP12.43□□□□□ -0.42
RAB28-205ENST00000508274 RPL36A-HNRNPH2H7BZ11 118 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 H7C417 338 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 M0R3G1 203 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 LY6HO94772 140 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 THY1P04216 161 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 CD247P20963 164 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 CALCRP30988 508 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 APOBEC3AP31941 199 aaPredicted RBP12.43□□□□□ -0.42
RAB28-205ENST00000508274 PCGF2P35227 344 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 GZMMP51124 257 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 POU3F1Q03052 451 aaPredicted RBP12.43□□□□□ -0.42
RAB28-205ENST00000508274 RAB35Q15286 201 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 ENTPD8Q5MY95 495 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 C1QTNF12Q5T7M4 302 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 CGB2Q6NT52 195 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 UEVLDQ8IX04 471 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 GPR137CQ8N3F9 429 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 OR6S1Q8NH40 331 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 MAGEE2Q8TD90 523 aaPredicted RBP12.43□□□□□ -0.42
RAB28-205ENST00000508274 TSPEARQ8WU66 669 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 FBXO17Q96EF6 278 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 TXNDC15Q96J42 360 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 EPYCQ99645 322 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 SIKE1Q9BRV8 207 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 TMEM43Q9BTV4 400 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 CRNNQ9UBG3 495 aaPredicted RBP12.43□□□□□ -0.42
RAB28-205ENST00000508274 CUBNO60494 3623 aa12.43□□□□□ -0.42
RAB28-205ENST00000508274 LOC102725191A0A1B0GVB3 256 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 FXYD1O00168 92 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 CHP2O43745 196 aa12.42□□□□□ -0.42
RAB28-205ENST00000508274 SERPINI2O75830 405 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms