RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 ZNF607Q96SK3 696 aa12.53□□□□□ -0.4
CDC42SE2-209ENST00000506419 CGREF1Q99674 301 aa12.53□□□□□ -0.4
CDC42SE2-209ENST00000506419 TMEM27Q9HBJ8 222 aa12.53□□□□□ -0.4
CDC42SE2-209ENST00000506419 GPR35Q9HC97 309 aa12.53□□□□□ -0.4
CDC42SE2-209ENST00000506419 OBP2BQ9NPH6 170 aa12.53□□□□□ -0.4
CDC42SE2-209ENST00000506419 LEF1Q9UJU2 399 aaPredicted RBP12.53□□□□□ -0.4
CDC42SE2-209ENST00000506419 NDUFAF1Q9Y375 327 aa12.53□□□□□ -0.4
CDC42SE2-209ENST00000506419 HEATR1Q9H583 2144 aaKnown RBP12.52□□□□□ -0.4
CDC42SE2-209ENST00000506419 PRORSD1PA6NEY8 169 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 HMGB1P1B2RPK0 211 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 H7C417 338 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 TRAF3IP2O43734 574 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 CD5LO43866 347 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 SERPINB7O75635 380 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 LYPD3O95274 346 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 IGLV1-44P01699 117 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 THY1P04216 161 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 HOXB1P14653 301 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 CALCRP30988 508 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 GZMMP51124 257 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 MTPNP58546 118 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 HGFACQ04756 655 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 C1DQ13901 141 aaKnown RBP12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 NPTX1Q15818 432 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 HMBOX1Q6NT76 420 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 KLHL24Q6TFL4 600 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 LINC00114Q6XXX2 140 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 DHDDSQ86SQ9 333 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 MYPOPQ86VE0 399 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 RBM45Q8IUH3 476 aaKnown RBP12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 ARMC8Q8IUR7 673 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 TMEM123Q8N131 208 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 ZNF525Q8N782 197 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 OR6S1Q8NH40 331 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 RNF217Q8TC41 542 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 STON2Q8WXE9 905 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 FBXO17Q96EF6 278 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 MOGAT1Q96PD6 335 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 ARHGDIGQ99819 225 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 EMC6Q9BV81 110 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 RABEP2Q9H5N1 569 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 RCE1Q9Y256 329 aa12.52□□□□□ -0.41
CDC42SE2-209ENST00000506419 ATRQ13535 2644 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 M0R3H8 397 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 EDF1O60869 148 aaKnown RBP12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 SLC43A1O75387 559 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 SASH3O75995 380 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 F12P00748 615 aaPredicted RBP12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 OPN1SWP03999 348 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 CELA3BP08861 270 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 CECR9P0C854 216 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 H2AFXP16104 143 aaPredicted RBP12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 GTF2E2P29084 291 aaKnown RBP12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 EFNA4P52798 201 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 RGS8P57771 180 aaPredicted RBP12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 UBE2NP61088 152 aaKnown RBP12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 NAAAQ02083 359 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 CEACAM16Q2WEN9 425 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 C5orf46Q6UWT4 87 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 TSPYL5Q86VY4 417 aaPredicted RBP12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 C20orf196Q8IYI0 205 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 FAM169BQ8N8A8 192 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 ADPRHL1Q8NDY3 354 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 ANKK1Q8NFD2 765 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 OR6T1Q8NGN1 323 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 MCHR1Q99705 422 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 KAT8Q9H7Z6 458 aaKnown RBP12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 VIPAS39Q9H9C1 493 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 CRLF2Q9HC73 371 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 NPHS2Q9NP85 383 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 YAE1D1Q9NRH1 226 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 TESQ9UGI8 421 aaKnown RBP12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 CORO2BQ9UQ03 480 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 PMF1-BGLAPU3KQ54 211 aa12.51□□□□□ -0.41
CDC42SE2-209ENST00000506419 FBP2O00757 339 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 PLPP3O14495 311 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 IGKV3-15P01624 115 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 CBR1P16152 277 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 SERPINF1P36955 418 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 DSCR9P59020 149 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 CHRNB3Q05901 458 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 RBBP4Q09028 425 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 ADIPOQQ15848 244 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 C3orf36Q3SXR2 165 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 CARD17Q5XLA6 110 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 CLEC2AQ6UVW9 174 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 WDR88Q6ZMY6 472 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 C11orf65Q8NCR3 313 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 BHLHE22Q8NFJ8 381 aaPredicted RBP12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 C10orf105Q8TEF2 133 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 ZNF317Q96PQ6 595 aaPredicted RBP12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 TNFRSF13CQ96RJ3 184 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 KATNB1Q9BVA0 655 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 CA10Q9NS85 328 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 MED29Q9NX70 200 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 ANGPT4Q9Y264 503 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 CR1P17927 2039 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 COL6A5A8TX70 2615 aa12.5□□□□□ -0.41
CDC42SE2-209ENST00000506419 A0A0G2JND7 137 aa12.49□□□□□ -0.41
CDC42SE2-209ENST00000506419 SLC35F4A4IF30 521 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms