RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 C10orf111Q8N326 155 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 DPP10Q8N608 796 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 PIK3C3Q8NEB9 887 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 OR6S1Q8NH40 331 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 MAGEE2Q8TD90 523 aaPredicted RBP10.44□□□□□ -0.74
MED28-203ENST00000503945 SLC26A7Q8TE54 656 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 STON2Q8WXE9 905 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 ANKRD27Q96NW4 1050 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 CGREF1Q99674 301 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 ASPNQ9BXN1 380 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 RSPO3Q9BXY4 272 aaPredicted RBP10.44□□□□□ -0.74
MED28-203ENST00000503945 IKZF5Q9H5V7 419 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 TESQ9UGI8 421 aaKnown RBP10.44□□□□□ -0.74
MED28-203ENST00000503945 RCE1Q9Y256 329 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 CORINQ9Y5Q5 1042 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 CUBNO60494 3623 aa10.44□□□□□ -0.74
MED28-203ENST00000503945 MXRA5Q9NR99 2828 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 ZNF726A6NNF4 738 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 M0R082 166 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 ZNF432O94892 652 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 AHCYP23526 432 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 SERPINF1P36955 418 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 CDH12P55289 794 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 ARF1P84077 181 aaKnown RBP10.43□□□□□ -0.74
MED28-203ENST00000503945 SLC25A3Q00325 362 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 DMTNQ08495 405 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 CYLC2Q14093 348 aaPredicted RBP10.43□□□□□ -0.74
MED28-203ENST00000503945 CLEC2AQ6UVW9 174 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 DNM1P46Q6ZS02 220 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 DHDDSQ86SQ9 333 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 SLC30A8Q8IWU4 369 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 UEVLDQ8IX04 471 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 FAM169BQ8N8A8 192 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 SMYD1Q8NB12 490 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 OR10H5Q8NGA6 315 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 ZNF417Q8TAU3 575 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 SLC38A2Q96QD8 506 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 ZNF587Q96SQ5 575 aaPredicted RBP10.43□□□□□ -0.74
MED28-203ENST00000503945 MCHR1Q99705 422 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 SH3GL1Q99961 368 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 CRLF2Q9HC73 371 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 NPHS2Q9NP85 383 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 CADP27708 2225 aa10.43□□□□□ -0.74
MED28-203ENST00000503945 ARPC4-TTLL3A0A0A6YYG9 625 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 A0A0B4J2E0 115 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 IGHV1-18A0A0C4DH31 117 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 A0A1B0GX12 115 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 RNF212BA8MTL3 300 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 ATP6V1G2-DDX39BF2Z307 99 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 H7C417 338 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 TLX2O43763 284 aaPredicted RBP10.42□□□□□ -0.74
MED28-203ENST00000503945 TPST2O60704 377 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 FMO6PO60774 539 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 EDF1O60869 148 aaKnown RBP10.42□□□□□ -0.74
MED28-203ENST00000503945 OR6A2O95222 327 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 F12P00748 615 aaPredicted RBP10.42□□□□□ -0.74
MED28-203ENST00000503945 VIMP08670 466 aaKnown RBP10.42□□□□□ -0.74
MED28-203ENST00000503945 CBR1P16152 277 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 EFNA4P52798 201 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 NFYCQ13952 458 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 DUSP7Q16829 419 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 C3orf36Q3SXR2 165 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 SWT1Q5T5J6 900 aaKnown RBP10.42□□□□□ -0.74
MED28-203ENST00000503945 INTS11Q5TA45 600 aaKnown RBP10.42□□□□□ -0.74
MED28-203ENST00000503945 C11orf71Q6IPW1 123 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 ZNF613Q6PF04 617 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 B3GLCTQ6Y288 498 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 LINGO2Q7L985 606 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 PATL1Q86TB9 770 aaKnown RBP10.42□□□□□ -0.74
MED28-203ENST00000503945 COMTD1Q86VU5 262 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 SNX32Q86XE0 403 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 SCAIQ8N9R8 606 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 IL17RDQ8NFM7 739 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 OR4F15Q8NGB8 312 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 FBXO17Q96EF6 278 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 SLC41A3Q96GZ6 507 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 LRR1Q96L50 414 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 ALKBH3Q96Q83 286 aaPredicted RBP10.42□□□□□ -0.74
MED28-203ENST00000503945 CPPED1Q9BRF8 314 aaPredicted RBP10.42□□□□□ -0.74
MED28-203ENST00000503945 KATNB1Q9BVA0 655 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 KAT8Q9H7Z6 458 aaKnown RBP10.42□□□□□ -0.74
MED28-203ENST00000503945 GPR35Q9HC97 309 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 B3GAT2Q9NPZ5 323 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 MRGBPQ9NV56 204 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 KLHL14Q9P2G3 628 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 B3GAT1Q9P2W7 334 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 SEC14L4Q9UDX3 406 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 NOX1Q9Y5S8 564 aa10.42□□□□□ -0.74
MED28-203ENST00000503945 IGKV1D-42A0A075B6H8 117 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 M0R3G1 203 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 MT-ATP6P00846 226 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 HIST1H2ABP04908 130 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 ARR3P36575 388 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 CAPZA2P47755 286 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 MTPNP58546 118 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 SWI5Q1ZZU3 235 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 MST1LQ2TV78 715 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 CEACAM16Q2WEN9 425 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 MMEL1Q495T6 779 aa10.41□□□□□ -0.74
MED28-203ENST00000503945 CARD17Q5XLA6 110 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms