RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CRYBB1P53674 252 aaPredicted RBP1.77□□□□□ -2.13
SMC4-227ENST00000497984 HTD2P86397 168 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 NCBP1Q09161 790 aaKnown RBP1.77□□□□□ -2.13
SMC4-227ENST00000497984 PYHIN1Q6K0P9 492 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 CES3Q6UWW8 571 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 ZDHHC21Q8IVQ6 265 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 UBALD2Q8IYN6 164 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 ZNF709Q8N972 641 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 ACTRT1Q8TDG2 376 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 SMIM10Q96HG1 83 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 ZNF641Q96N77 438 aaPredicted RBP1.77□□□□□ -2.13
SMC4-227ENST00000497984 ZNF2Q9BSG1 426 aaPredicted RBP1.77□□□□□ -2.13
SMC4-227ENST00000497984 RWDD1Q9H446 243 aaPredicted RBP1.77□□□□□ -2.13
SMC4-227ENST00000497984 RPP21Q9H633 154 aaKnown RBP1.77□□□□□ -2.13
SMC4-227ENST00000497984 NHEJ1Q9H9Q4 299 aaPredicted RBP1.77□□□□□ -2.13
SMC4-227ENST00000497984 NOX3Q9HBY0 568 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 FARSBQ9NSD9 589 aaKnown RBP1.77□□□□□ -2.13
SMC4-227ENST00000497984 XCL2Q9UBD3 114 aa1.77□□□□□ -2.13
SMC4-227ENST00000497984 TRAV40A0A0B4J280 105 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 IGHV3-66A0A0C4DH42 116 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 KIR2DS1A0A191URI9 304 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 A0A1B0GWJ7 208 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 RBMY1BA6NDE4 496 aaKnown RBP1.76□□□□□ -2.13
SMC4-227ENST00000497984 RBMY1EA6NEQ0 496 aaKnown RBP1.76□□□□□ -2.13
SMC4-227ENST00000497984 COLCA2A8K830 154 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 B4GALT2O60909 372 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 RCBTB2O95199 551 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 RBMY1DP0C7P1 496 aaKnown RBP1.76□□□□□ -2.13
SMC4-227ENST00000497984 RBMY1A1P0DJD3 496 aaKnown RBP1.76□□□□□ -2.13
SMC4-227ENST00000497984 PSMC3P17980 439 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 CELP19835 753 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 BTCP35070 178 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 CA8P35219 290 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 ERVK-25P63136 954 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 C1orf61Q13536 156 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 SELPLGQ14242 412 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 KIR2DS1Q14954 304 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 OXA1LQ15070 435 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 DPYSL2Q16555 572 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 GUCA2BQ16661 112 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 KRTAP13-2Q52LG2 175 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 RIPPLY2Q5TAB7 128 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 Q5W150 140 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 C15orf56Q8N910 161 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 AURKBQ96GD4 344 aaPredicted RBP1.76□□□□□ -2.13
SMC4-227ENST00000497984 TGM7Q96PF1 710 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 RNF2Q99496 336 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 CAPS2Q9BXY5 557 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 ZFP14Q9HCL3 533 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 SLC40A1Q9NP59 571 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 GIN1Q9NXP7 522 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 MARCOQ9UEW3 520 aaPredicted RBP1.76□□□□□ -2.13
SMC4-227ENST00000497984 WIF1Q9Y5W5 379 aa1.76□□□□□ -2.13
SMC4-227ENST00000497984 PHF3Q92576 2039 aaKnown RBP1.76□□□□□ -2.13
SMC4-227ENST00000497984 PLA2R1Q13018 1463 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 ATP8B3O60423 1300 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 IGSF9BQ9UPX0 1349 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 PRSS37A4D1T9 235 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 MBLAC1A4D2B0 266 aaPredicted RBP1.75□□□□□ -2.13
SMC4-227ENST00000497984 ZNF705GA8MUZ8 300 aaPredicted RBP1.75□□□□□ -2.13
SMC4-227ENST00000497984 A8MXQ7 604 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 PRKAB2O43741 272 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 ENTPD5O75356 428 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 DCNP07585 359 aaKnown RBP1.75□□□□□ -2.13
SMC4-227ENST00000497984 GKN3PP0CG01 181 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 HSMCR30P0CW71 290 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 ZNF14P17017 642 aaPredicted RBP1.75□□□□□ -2.13
SMC4-227ENST00000497984 PGAM1P18669 254 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 PCMT1P22061 227 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 CDC37Q16543 378 aaPredicted RBP1.75□□□□□ -2.13
SMC4-227ENST00000497984 CHRFAM7AQ494W8 412 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 KCNIP4Q6PIL6 250 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 SLC25A34Q6PIV7 304 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 CCDC80Q76M96 950 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 GET4Q7L5D6 327 aaPredicted RBP1.75□□□□□ -2.13
SMC4-227ENST00000497984 BHLHA15Q7RTS1 189 aaPredicted RBP1.75□□□□□ -2.13
SMC4-227ENST00000497984 CCDC65Q8IXS2 484 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 ZNF683Q8IZ20 524 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 PGAM4Q8N0Y7 254 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 FNDC5Q8NAU1 212 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 UFD1Q92890 307 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 SMARCD2Q92925 531 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 UBE2E3Q969T4 207 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 OR2A5Q96R48 311 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 GBA3Q9H227 469 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 RNF167Q9H6Y7 350 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 SIRT7Q9NRC8 400 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 EXD2Q9NVH0 621 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 THUMPD1Q9NXG2 353 aaKnown RBP1.75□□□□□ -2.13
SMC4-227ENST00000497984 CALYQ9NYX4 217 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 PIPOXQ9P0Z9 390 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 GGA2Q9UJY4 613 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 AURKCQ9UQB9 309 aa1.75□□□□□ -2.13
SMC4-227ENST00000497984 PNPLA6Q8IY17 1366 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 ALDOBP05062 364 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 CSF3P09919 207 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 TLX1NBP0CAT3 122 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 NCF1P14598 390 aaPredicted RBP1.74□□□□□ -2.13
SMC4-227ENST00000497984 ZNF30P17039 623 aa1.74□□□□□ -2.13
SMC4-227ENST00000497984 DRD5P21918 477 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms