RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 PIGHQ14442 188 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-224ENST00000497488 MAPRE2Q15555 327 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 TRIP6Q15654 476 aaKnown RBP5.14□□□□□ -1.59
BRCA1-224ENST00000497488 TAB1Q15750 504 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 DUSP7Q16829 419 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 SOHLH1Q5JUK2 328 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 OR8G2PQ6IF36 304 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 ASCL5Q7RTU5 278 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 IFNEQ86WN2 208 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 IQCKQ8N0W5 287 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 MS4A15Q8N5U1 240 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 TTC29Q8NA56 475 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-224ENST00000497488 NUBPLQ8TB37 319 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 TCP10LQ8TDR4 215 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 SETD7Q8WTS6 366 aaKnown RBP5.14□□□□□ -1.59
BRCA1-224ENST00000497488 MYDGFQ969H8 173 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 TOMM40LQ969M1 308 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 CCDC126Q96EE4 140 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 OR5B2Q96R09 309 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 ECSITQ9BQ95 431 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 MAP1LC3CQ9BXW4 147 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 UCK2Q9BZX2 261 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 GBA3Q9H227 469 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 ATP13A3Q9H7F0 1226 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 EBF2Q9HAK2 575 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 CD209Q9NNX6 404 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 ZC4H2Q9NQZ6 224 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 TAS2R16Q9NYV7 291 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 STMN3Q9NZ72 180 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 KLK11Q9UBX7 282 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 TJP1Q07157 1748 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 QSER1Q2KHR3 1735 aa5.14□□□□□ -1.59
BRCA1-224ENST00000497488 POLR2AP24928 1970 aaKnown RBP5.13□□□□□ -1.59
BRCA1-224ENST00000497488 KRTAP4-8A0A0G2JLE6 195 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 TRBV7-9A0A0J9YWB2 115 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 IQANK1A0A1B0GTG1 560 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 TCRBV9S1A1TA0A576 114 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 HSD17B6O14756 317 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 ENTPD5O75356 428 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 CST4P01036 141 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 MYOGP15173 224 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 ABOP16442 354 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 IDSP22304 550 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 UGT1A3P35503 534 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 SLC26A3P40879 764 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 RPS27AP62979 156 aaKnown RBP5.13□□□□□ -1.59
BRCA1-224ENST00000497488 MRPS22P82650 360 aaKnown RBP5.13□□□□□ -1.59
BRCA1-224ENST00000497488 PLP2Q04941 152 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 LTBQ06643 244 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF33BQ06732 778 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 PTPN20Q4JDL3 420 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 IGFL4Q6B9Z1 124 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 TMIGD1Q6UXZ0 262 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 CERS6Q6ZMG9 384 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 MBOAT1Q6ZNC8 495 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 SLC26A9Q7LBE3 791 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 CEACAM19Q7Z692 300 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 GGNQ86UU5 652 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 PLCZ1Q86YW0 608 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 CYB561A3Q8NBI2 242 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 DYRK2Q92630 601 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 ZNF514Q96K75 400 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-224ENST00000497488 PLEKHF1Q96S99 279 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 FAM173AQ9BQD7 235 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 CLEC5AQ9NY25 188 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 NKIRAS1Q9NYS0 192 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 WRAP73Q9P2S5 460 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-224ENST00000497488 DDX19BQ9UMR2 479 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 COL5A3P25940 1745 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-224ENST00000497488 ADCY9O60503 1353 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 CEMIPQ8WUJ3 1361 aa5.13□□□□□ -1.59
BRCA1-224ENST00000497488 CICQ96RK0 1608 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-224ENST00000497488 COL24A1Q17RW2 1714 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 SIPA1L3O60292 1781 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-224ENST00000497488 VIRMAQ69YN4 1812 aaKnown RBP5.12□□□□□ -1.59
BRCA1-224ENST00000497488 UBR3Q6ZT12 1888 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 E7ENQ6 273 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 C11orf98E9PRG8 122 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 ITGB1BP1O14713 200 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 TNFSF12O43508 249 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 HSBP1O75506 76 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 OR7A10O76100 309 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 AP2A2O94973 939 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 RPN2P04844 631 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 PRSS56P0CW18 603 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 HOXA6P31267 233 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 RPL9P32969 192 aaKnown RBP5.12□□□□□ -1.59
BRCA1-224ENST00000497488 P2RY2P41231 377 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 CCNHP51946 323 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-224ENST00000497488 PEX3P56589 373 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 ADARB1P78563 741 aaKnown RBP5.12□□□□□ -1.59
BRCA1-224ENST00000497488 PAX2Q02962 417 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 GNA13Q14344 377 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 DGUOKQ16854 277 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 TRIM16LQ309B1 348 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 EIPR1Q53HC9 387 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 PPM1LQ5SGD2 360 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 FAM120AOSQ5T036 256 aa5.12□□□□□ -1.59
BRCA1-224ENST00000497488 LCE4AQ5TA78 99 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms