RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 MARCH9Q86YJ5 346 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 DEFB124Q8NES8 71 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 NLGN4YQ8NFZ3 816 aaPredicted RBP12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 OR5M1Q8NGP8 315 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 OR6Q1Q8NGQ2 317 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 DCLRE1CQ96SD1 692 aaKnown RBP12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 ANGPTL4Q9BY76 406 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 INIPQ9NRY2 104 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 TXNL4BQ9NX01 149 aaKnown RBP12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 E9PI62 339 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 TNFRSF10AO00220 468 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 RNF13O43567 381 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 SELENOFO60613 162 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 LRP3O75074 770 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 GLCEO94923 617 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 GABRA5P31644 462 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 OR12D2P58182 307 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 FABP5Q01469 135 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 LGALS3BPQ08380 585 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 ACKR1Q16570 336 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 H3F3CQ6NXT2 135 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 CD200R1LQ6Q8B3 271 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 TMEM156Q8N614 296 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 POMGNT2Q8NAT1 580 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 OR6K6Q8NGW6 343 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 MFSD8Q8NHS3 518 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 ALG12Q9BV10 488 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 GPR87Q9BY21 358 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 NDEL1Q9GZM8 345 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 NXF2Q9GZY0 626 aaKnown RBP12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 RERGLQ9H628 205 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 CCDC59Q9P031 241 aaKnown RBP12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 SSR3Q9UNL2 185 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 CORINQ9Y5Q5 1042 aa12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 MRPS18BQ9Y676 258 aaKnown RBP12.33□□□□□ -0.44
SPTBN1-205ENST00000496323 LOC101059948A0A1B0GTJ6 334 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 C21orf140B9A014 251 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 ZNF670-ZNF695F2Z2N8 137 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 H3BML4 177 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 RPS19P39019 145 aaKnown RBP12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 ACTC1P68032 377 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 ACTA1P68133 377 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 BDH1Q02338 343 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 C19orf57Q0VDD7 668 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 OR7A5Q15622 319 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 ZNF404Q494X3 552 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 LCN1P1Q5VSP4 162 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 LINC00299Q6ZSB3 139 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 MDGA2Q7Z553 956 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 PLCZ1Q86YW0 608 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 SLC35F2Q8IXU6 374 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 OR6V1Q8N148 313 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 KDM8Q8N371 416 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 ARIH2OSQ8N7S6 290 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 ZNF511Q8NB15 262 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 OR4K17Q8NGC6 315 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 MCFD2Q8NI22 146 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 ZNF519Q8TB69 540 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 DDIT4LQ96D03 193 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 C4orf36Q96KX1 117 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 FAM86C1Q9NVL1 165 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 HPF1Q9NWY4 346 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 COPS3Q9UNS2 423 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 OTOGLQ3ZCN5 2332 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 PCNX3Q9H6A9 2034 aa12.32□□□□□ -0.44
SPTBN1-205ENST00000496323 G3V3Y1 287 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 MS4A18H0YCH9 400 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 MAGEB4O15481 346 aaPredicted RBP12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 RAD1O60671 282 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 SERPINA7P05543 415 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 OR2T7P0C7T2 308 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 HLA-DOBP13765 273 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 MAP2K6P52564 334 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 RPL27P61353 136 aaKnown RBP12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.31□□□□□ -0.443e-11■■□□□ 12.5
SPTBN1-205ENST00000496323 MS4A18Q3C1V0 323 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 ZNF829Q3KNS6 432 aaPredicted RBP12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 GLYR1Q49A26 553 aaPredicted RBP12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 SLC22A10Q63ZE4 541 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 C22orf42Q6IC83 251 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 DND1Q8IYX4 353 aaKnown RBP12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 OR2T27Q8NH04 317 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 PSMF1Q92530 271 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 POTEKPQ9BYX7 375 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 TTTY10Q9BZA0 68 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 SYT4Q9H2B2 425 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 TXNIPQ9H3M7 391 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 CCDC86Q9H6F5 360 aaKnown RBP12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 PLGRKTQ9HBL7 147 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 SRA1Q9HD15 236 aaKnown RBP12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 AKIP1Q9NQ31 210 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 WDR70Q9NW82 654 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 ANKRD10Q9NXR5 420 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 NOX1Q9Y5S8 564 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 RALGAPA1Q6GYQ0 2036 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 SPAARA0A1B0GVQ0 90 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 LIPT2A6NK58 231 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 J3QLW9 94 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 SLC30A4O14863 429 aa12.31□□□□□ -0.44
SPTBN1-205ENST00000496323 ARHGEF9O43307 516 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms