RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	PTGES3	Q15185	160 aa	Known RBP	12.11	□□□□□ -0.47
APTX-231	ENST00000494973	PGGHG	Q32M88	737 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	ACSF3	Q4G176	576 aa	Predicted RBP	12.11	□□□□□ -0.47
APTX-231	ENST00000494973	EEF1A1P5	Q5VTE0	462 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	ADCK1	Q86TW2	530 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	KIF18B	Q86Y91	864 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.11	□□□□□ -0.47
APTX-231	ENST00000494973	LNX2	Q8N448	690 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	TMEM99	Q8N816	258 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	FNDC8	Q8TC99	324 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	WNT2B	Q93097	391 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	PLEKHA8	Q96JA3	519 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	HRASLS5	Q96KN8	279 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	SAMD8	Q96LT4	415 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	ZNF570	Q96NI8	536 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	PITX2	Q99697	317 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	TUBA1C	Q9BQE3	449 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	GRIP2	Q9C0E4	1043 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	TXNIP	Q9H3M7	391 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	EGLN3	Q9H6Z9	239 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	NRIP3	Q9NQ35	241 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	IMPAD1	Q9NX62	359 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	TAS2R5	Q9NYW4	299 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	GRHPR	Q9UBQ7	328 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	KLHL21	Q9UJP4	597 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	RCE1	Q9Y256	329 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	HSPE1-MOB4	S4R3N1	261 aa		12.11	□□□□□ -0.47
APTX-231	ENST00000494973	LAMA5	O15230	3695 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	IGKV3D-15	A0A087WSY6	115 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	OR6C65	A6NJZ3	312 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	RIIAD1	A6NNX1	92 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	ZNF724	A8MTY0	619 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	C11orf98	E9PRG8	122 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	XKRY	O14609	159 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	AHCYL1	O43865	530 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	SLC19A2	O60779	497 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	MITF	O75030	526 aa	Predicted RBP	12.1	□□□□□ -0.47
APTX-231	ENST00000494973	TXNDC12	O95881	172 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	BCL10	O95999	233 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	PLG	P00747	810 aa	Predicted RBP	12.1	□□□□□ -0.47
APTX-231	ENST00000494973	ACVR2A	P27037	513 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	SDHA	P31040	664 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	GIPR	P48546	466 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	P2RY4	P51582	365 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	CTXN1	P60606	82 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	CDK5	Q00535	292 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	HSF1	Q00613	529 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	POU3F1	Q03052	451 aa	Predicted RBP	12.1	□□□□□ -0.47
APTX-231	ENST00000494973	C19orf57	Q0VDD7	668 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	GINS1	Q14691	196 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	GXYLT1	Q4G148	440 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	C1orf185	Q5T7R7	199 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	SLX4IP	Q5VYV7	408 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	NSUN5P2	Q63ZY6	315 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973		Q6ZPB1	254 aa	Predicted RBP	12.1	□□□□□ -0.47
APTX-231	ENST00000494973	ADGRE4P	Q86SQ3	457 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	GPAT4	Q86UL3	456 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	MEX3D	Q86XN8	651 aa	Known RBP	12.1	□□□□□ -0.47
APTX-231	ENST00000494973	LRRC75A	Q8NAA5	344 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	OR9K2	Q8NGE7	335 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	TRUB1	Q8WWH5	349 aa	Known RBP	12.1	□□□□□ -0.47
APTX-231	ENST00000494973	CYGB	Q8WWM9	190 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	SNX18	Q96RF0	628 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	KATNB1	Q9BVA0	655 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	PARPBP	Q9NWS1	579 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	FAM118A	Q9NWS6	357 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	CLCF1	Q9UBD9	225 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	ZNF835	Q9Y2P0	537 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	GMPPB	Q9Y5P6	360 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	MED12	Q93074	2177 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	ZZEF1	O43149	2961 aa		12.1	□□□□□ -0.47
APTX-231	ENST00000494973	EPG5	Q9HCE0	2579 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	SVIL	O95425	2214 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	LOC100130705	A0A1B0GUX0	176 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973		H0YC42	278 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	BHLHE40	O14503	412 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	TP53	P04637	393 aa	Predicted RBP	12.09	□□□□□ -0.47
APTX-231	ENST00000494973	CRH	P06850	196 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	ZNF3	P17036	446 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	PAICS	P22234	425 aa	Known RBP	12.09	□□□□□ -0.47
APTX-231	ENST00000494973	GGT2	P36268	569 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	RPL27	P61353	136 aa	Known RBP	12.09	□□□□□ -0.47
APTX-231	ENST00000494973	MYBPC1	Q00872	1141 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	RASGEF1B	Q0VAM2	473 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	FHL1	Q13642	323 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	SLC17A1	Q14916	467 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	ZIK1	Q3SY52	487 aa	Predicted RBP	12.09	□□□□□ -0.47
APTX-231	ENST00000494973	CLEC12A	Q5QGZ9	265 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	ZNF585A	Q6P3V2	769 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	SLC35D2	Q76EJ3	337 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	CD163	Q86VB7	1156 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	JAZF1	Q86VZ6	243 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	MOSPD2	Q8NHP6	518 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	FNDC9	Q8TBE3	224 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	TMEM45B	Q96B21	275 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	DNAJA3	Q96EY1	480 aa		12.09	□□□□□ -0.47
APTX-231	ENST00000494973	GMPPA	Q96IJ6	420 aa	Predicted RBP	12.09	□□□□□ -0.47
APTX-231	ENST00000494973	ZNF845	Q96IR2	970 aa	Predicted RBP	12.09	□□□□□ -0.47
APTX-231	ENST00000494973	ERMAP	Q96PL5	475 aa	Predicted RBP	12.09	□□□□□ -0.47
APTX-231	ENST00000494973	TRIB1	Q96RU8	372 aa		12.09	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms