RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 TTC33Q6PID6 262 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-224ENST00000494132 TUBA1AQ71U36 451 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 ARPINQ7Z6K5 226 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 VTCN1Q7Z7D3 282 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 P2RY8Q86VZ1 359 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 TGIF2LYQ8IUE0 185 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 NKAIN4Q8IVV8 208 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 UEVLDQ8IX04 471 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 LRRC17Q8N6Y2 441 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 PIGTQ969N2 578 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 TXNDC15Q96J42 360 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 USB1Q9BQ65 265 aaKnown RBP12.89□□□□□ -0.35
ATG4B-224ENST00000494132 AMBRA1Q9C0C7 1298 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 SLC17A5Q9NRA2 495 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 LAMP3Q9UQV4 416 aa12.89□□□□□ -0.35
ATG4B-224ENST00000494132 A0A096LPE4 126 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 A0A1W2PPZ6 126 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 SHISA9B4DS77 424 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 CXCR6O00574 342 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 SEC14L2O76054 403 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 ZNF432O94892 652 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 ADORA3P0DMS8 318 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 UMPSP11172 480 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 FUT4P22083 530 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 HOXC12P31275 282 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 YAP1P46937 504 aaKnown RBP12.88□□□□□ -0.35
ATG4B-224ENST00000494132 UGT2B15P54855 530 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 NKX6-1P78426 367 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-224ENST00000494132 ROR2Q01974 943 aaKnown RBP12.88□□□□□ -0.35
ATG4B-224ENST00000494132 MFSD13AQ14CX5 517 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 ZNF74Q16587 644 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 Q5PR19 223 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 C8orf82Q6P1X6 216 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-224ENST00000494132 ZNF611Q8N823 705 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 OR1K1Q8NGR3 316 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 OR5J2Q8NH18 312 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 PFN4Q8NHR9 129 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 TMEM255BQ8WV15 326 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 FBXW5Q969U6 566 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 ZNF837Q96EG3 531 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-224ENST00000494132 OR2M2Q96R28 347 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 PCDHAC1Q9H158 963 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 ALG2Q9H553 416 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 MRPL39Q9NYK5 338 aaKnown RBP12.88□□□□□ -0.35
ATG4B-224ENST00000494132 CORINQ9Y5Q5 1042 aa12.88□□□□□ -0.35
ATG4B-224ENST00000494132 SLC35F4A4IF30 521 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 M0R3G1 203 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 PLPP3O14495 311 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 GSTA4O15217 222 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 PIP5K1CO60331 668 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 SLC43A1O75387 559 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 ZNF682O95780 498 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 IFNA14P01570 189 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 SOD3P08294 240 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 CD99P14209 185 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 CDH11P55287 796 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 PSME3P61289 254 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 TGFBR3Q03167 851 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 PUDPQ08623 228 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 CAMK2DQ13557 499 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 TBRG1Q3YBR2 411 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 ZNF672Q499Z4 452 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-224ENST00000494132 HMBOX1Q6NT76 420 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 ABHD12BQ7Z5M8 362 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-224ENST00000494132 TMEM123Q8N131 208 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 RNF148Q8N7C7 305 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 SCAIQ8N9R8 606 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 RBM15BQ8NDT2 890 aaKnown RBP12.87□□□□□ -0.35
ATG4B-224ENST00000494132 ADPRHL1Q8NDY3 354 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 C1orf162Q8NEQ5 155 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-224ENST00000494132 OR6S1Q8NH40 331 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 TMEM171Q8WVE6 324 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 HOPXQ9BPY8 73 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-224ENST00000494132 NELFAQ9H3P2 528 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 MEPEQ9NQ76 525 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-224ENST00000494132 RHCGQ9UBD6 479 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 RCE1Q9Y256 329 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 SNX13Q9Y5W8 968 aa12.87□□□□□ -0.35
ATG4B-224ENST00000494132 FLNAP21333 2647 aaKnown RBP12.87□□□□□ -0.35
ATG4B-224ENST00000494132 VPS13CQ709C8 3753 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 J3KTA2 159 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 MT-ATP6P00846 226 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 CD40P25942 277 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 CDKN1AP38936 164 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 SELENOWP63302 87 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 LSM11P83369 360 aaKnown RBP eCLIP12.86□□□□□ -0.35
ATG4B-224ENST00000494132 ARF1P84077 181 aaKnown RBP12.86□□□□□ -0.35
ATG4B-224ENST00000494132 MELKQ14680 651 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 CEACAM16Q2WEN9 425 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 SLC22A25Q6T423 547 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 KLHL17Q6TDP4 642 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 KLHL24Q6TFL4 600 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 TMEM108Q6UXF1 575 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 HACD2Q6Y1H2 254 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 B3GLCTQ6Y288 498 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 SLC46A3Q7Z3Q1 461 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 GPR137CQ8N3F9 429 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 C17orf78Q8N4C9 275 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 FAM156AQ8NDB6 213 aa12.86□□□□□ -0.35
ATG4B-224ENST00000494132 IGFBPL1Q8WX77 278 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms