RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 BTBD16Q32M84 506 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 WBP2NLQ6ICG8 309 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 MZT2BQ6NZ67 158 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 APOOLQ6UXV4 268 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 Q7L0L9 218 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 SAMD12Q8N8I0 201 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 OR13C5Q8NGS8 318 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 FBXW5Q969U6 566 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 NUDT9Q9BW91 350 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 INPP5EQ9NRR6 644 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 FGF21Q9NSA1 209 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 BABAM2Q9NXR7 383 aa12.57□□□□□ -0.4
VCP-207ENST00000493886 LAMA1P25391 3075 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 A0A1B0GX78 115 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 OR6C65A6NJZ3 312 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 MCIDASD6RGH6 385 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 PRSS44E7EML9 344 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 MAGEB4O15481 346 aaPredicted RBP12.56□□□□□ -0.4
VCP-207ENST00000493886 SBK2P0C263 348 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 ARSBP15848 533 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 ACVR1BP36896 505 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 SKP2Q13309 424 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 NSDHLQ15738 373 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 YIF1BQ5BJH7 314 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 TSSK4Q6SA08 328 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 CBLN3Q6UW01 205 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 KRT74Q7RTS7 529 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 SYT9Q86SS6 491 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 CDH26Q8IXH8 852 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 OR52E2Q8NGJ4 325 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 TRIM63Q969Q1 353 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 CCDC74AQ96AQ1 378 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 ZNF501Q96CX3 271 aaPredicted RBP12.56□□□□□ -0.4
VCP-207ENST00000493886 CMTM3Q96MX0 182 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 ADGRL4Q9HBW9 690 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 ASB6Q9NWX5 421 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 MRTO4Q9UKD2 239 aaKnown RBP12.56□□□□□ -0.4
VCP-207ENST00000493886 IER3IP1Q9Y5U9 82 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 RNF13O43567 381 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 TRAPPC2P0DI81 140 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 TRAPPC2BP0DI82 140 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 HIST1H1CP16403 213 aaKnown RBP12.56□□□□□ -0.4
VCP-207ENST00000493886 SRP9P49458 86 aaKnown RBP12.56□□□□□ -0.4
VCP-207ENST00000493886 ACY1Q03154 408 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 MTFR2Q6P444 385 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 PM20D2Q8IYS1 436 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 PRR22Q8IZ63 422 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 FAM98AQ8NCA5 519 aaKnown RBP12.56□□□□□ -0.4
VCP-207ENST00000493886 SDR9C7Q8NEX9 313 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 OR4K13Q8NH42 304 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 KIAA1143Q96AT1 154 aaPredicted RBP12.56□□□□□ -0.4
VCP-207ENST00000493886 PHF21AQ96BD5 680 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 ADOQ96SZ5 270 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 SLC19A3Q9BZV2 496 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 ZNF768Q9H5H4 540 aaKnown RBP12.56□□□□□ -0.4
VCP-207ENST00000493886 HAO2Q9NYQ3 351 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 ZNF175Q9Y473 711 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 HSPB11Q9Y547 144 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 NUP210LQ5VU65 1888 aa12.56□□□□□ -0.4
VCP-207ENST00000493886 IGKV1D-42A0A075B6H8 117 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 ELOA3DA6NLF2 546 aaPredicted RBP12.55□□□□□ -0.4
VCP-207ENST00000493886 ZNF264O43296 627 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 EIF4EP06730 217 aaKnown RBP12.55□□□□□ -0.4
VCP-207ENST00000493886 E2F1Q01094 437 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 ELOA3BQ3SY89 546 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 ELOA3Q8NG57 546 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 OR4M1Q8NGD0 313 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 DAZLQ92904 295 aaKnown RBP12.55□□□□□ -0.4
VCP-207ENST00000493886 CCNL2Q96S94 520 aaPredicted RBP12.55□□□□□ -0.4
VCP-207ENST00000493886 NRSN2Q9GZP1 204 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 EXOSC3Q9NQT5 275 aaKnown RBP12.55□□□□□ -0.4
VCP-207ENST00000493886 NUP50Q9UKX7 468 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 ZNF337Q9Y3M9 751 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 FER1L5A0AVI2 2057 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 CACNA1EQ15878 2313 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 INMT-MINDY4F8WBC2 141 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 SEC14L5O43304 696 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 EEF1E1O43324 174 aaKnown RBP12.55□□□□□ -0.4
VCP-207ENST00000493886 SERPINI2O75830 405 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 TFPIP10646 304 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 RPL4P36578 427 aaKnown RBP12.55□□□□□ -0.4
VCP-207ENST00000493886 DHPSP49366 369 aaPredicted RBP12.55□□□□□ -0.4
VCP-207ENST00000493886 AP2S1P53680 142 aaPredicted RBP12.55□□□□□ -0.4
VCP-207ENST00000493886 DCAF7P61962 342 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 EBPQ15125 230 aaKnown RBP12.55□□□□□ -0.4
VCP-207ENST00000493886 BCL2L15Q5TBC7 163 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 YOD1Q5VVQ6 348 aaPredicted RBP12.55□□□□□ -0.4
VCP-207ENST00000493886 ATG4DQ86TL0 474 aaPredicted RBP12.55□□□□□ -0.4
VCP-207ENST00000493886 C9orf40Q8IXQ3 194 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 OR14A16Q8NHC5 309 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 SMPDL3BQ92485 455 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 LRFN5Q96NI6 719 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 VN1R1Q9GZP7 353 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 KLHL21Q9UJP4 597 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 SPATA2Q9UM82 520 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 RASD1Q9Y272 281 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 ADAM18Q9Y3Q7 739 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 CDC14CA4D256 554 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 ICOSLGO75144 302 aa12.55□□□□□ -0.4
VCP-207ENST00000493886 PNMTP11086 282 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms