RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 CST5P28325 142 aaPredicted RBP18.65■□□□□ 0.58
RNF40-203ENST00000493683 OR1D4P47884 311 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 CCR9P51686 369 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 ESCO2Q56NI9 601 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 LYSMD4Q5XG99 296 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 ALKAL2Q6UX46 152 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 ALKAL1Q6UXT8 129 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 OR5K3A6NET4 321 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 TMEM221A6NGB7 291 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 CD38P28907 300 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 TEKQ02763 1124 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 Q6ZSR9 355 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 ADGRE4PQ86SQ3 457 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 OR11L1Q8NGX0 322 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 PRELID3BQ9Y3B1 194 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 A0A1B0GVG6 124 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 OR52I1Q8NGK6 324 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 TNFRSF13CQ96RJ3 184 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 CCNL2Q96S94 520 aaPredicted RBP18.65■□□□□ 0.58
RNF40-203ENST00000493683 LOC100289279A0A1B0GTE1 492 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 ZNF728P0DKX0 622 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 TACR1P25103 407 aa18.65■□□□□ 0.58
RNF40-203ENST00000493683 EIF1P41567 113 aaKnown RBP18.65■□□□□ 0.58
RNF40-203ENST00000493683 GMPR2Q9P2T1 348 aaKnown RBP18.65■□□□□ 0.58
RNF40-203ENST00000493683 OR2A25A4D2G3 310 aa18.64■□□□□ 0.58
RNF40-203ENST00000493683 LALBAP00709 142 aa18.64■□□□□ 0.58
RNF40-203ENST00000493683 DEFA6Q01524 100 aa18.64■□□□□ 0.58
RNF40-203ENST00000493683 C17orf67Q0P5P2 114 aa18.64■□□□□ 0.58
RNF40-203ENST00000493683 FAPQ12884 760 aa18.64■□□□□ 0.58
RNF40-203ENST00000493683 SLC36A2Q495M3 483 aa18.64■□□□□ 0.58
RNF40-203ENST00000493683 AVPI1Q5T686 147 aa18.64■□□□□ 0.58
RNF40-203ENST00000493683 KDM4DQ6B0I6 523 aa18.64■□□□□ 0.58
RNF40-203ENST00000493683 SGPP1Q9BX95 441 aa18.64■□□□□ 0.58
RNF40-203ENST00000493683 PCDHGA1Q9Y5H4 931 aa18.64■□□□□ 0.58
RNF40-203ENST00000493683 MYH3P11055 1940 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 NUPL2O15504 423 aaKnown RBP18.64■□□□□ 0.57
RNF40-203ENST00000493683 OR7C1O76099 320 aaPredicted RBP18.64■□□□□ 0.57
RNF40-203ENST00000493683 SLC35E2P0CK97 266 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 DPP4P27487 766 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 HLA-FP30511 346 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 PPT1P50897 306 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 MFAP5Q13361 173 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 LFNGQ8NES3 379 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 OR13C9Q8NGT0 318 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 CER1O95813 267 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 CD46P15529 392 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 NAA40Q86UY6 237 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 PTGER4P35408 488 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 HTR4Q13639 388 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 MARCH8Q5T0T0 291 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 Q6ZPB1 254 aaPredicted RBP18.64■□□□□ 0.57
RNF40-203ENST00000493683 Q6ZTK2 550 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 FAM122BQ7Z309 247 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 MRPL43Q8N983 215 aaKnown RBP18.64■□□□□ 0.57
RNF40-203ENST00000493683 FBXL2Q9UKC9 423 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 NAV1Q8NEY1 1877 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 A0A0B4J2A0 478 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 GFRA2O00451 464 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 SHC1P29353 583 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 CXCL12P48061 93 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 LCORQ96JN0 433 aaPredicted RBP18.64■□□□□ 0.57
RNF40-203ENST00000493683 LRFN5Q96NI6 719 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 LRIT1Q9P2V4 623 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 SHPKQ9UHJ6 478 aa18.64■□□□□ 0.57
RNF40-203ENST00000493683 BTBD17A6NE02 478 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 MT-ATP6P00846 226 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 ATPAF1Q5TC12 328 aaPredicted RBP18.63■□□□□ 0.57
RNF40-203ENST00000493683 SIAH3Q8IW03 269 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 HDAC8Q9BY41 377 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 C11orf54Q9H0W9 315 aaPredicted RBP18.63■□□□□ 0.57
RNF40-203ENST00000493683 HIPK2Q9H2X6 1198 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 NGBQ9NPG2 151 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 HCFC1R1Q9NWW0 138 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 TRAPPC2LQ9UL33 140 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 PCYT1BQ9Y5K3 369 aaPredicted RBP18.63■□□□□ 0.57
RNF40-203ENST00000493683 MYH10P35580 1976 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 BEX5Q5H9J7 111 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 CST9LP1Q5W188 147 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 OR2A12Q8NGT7 310 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 PRSS16Q9NQE7 514 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 TMEM129A0AVI4 362 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 CD14P08571 375 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 POU3F3P20264 500 aaPredicted RBP18.63■□□□□ 0.57
RNF40-203ENST00000493683 HOXC8P31273 242 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 RFX2P48378 723 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 RAB11AP62491 216 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 SOHLH1Q5JUK2 328 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 SNX11Q9Y5W9 270 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 HCRTR1O43613 425 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 PIP5K1CO60331 668 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 CHRM2P08172 466 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 C18orf63Q68DL7 685 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 AAED1Q7RTV5 226 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 OVCH1Q7RTY7 1134 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 SCARB1Q8WTV0 552 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 CHTF18Q8WVB6 975 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 TM4SF18Q96CE8 201 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 C20orf85Q9H1P6 137 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 CXorf36Q9H7Y0 433 aa18.63■□□□□ 0.57
RNF40-203ENST00000493683 SAGE1Q9NXZ1 904 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms