RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 EFNA4P52798 201 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 MTPNP58546 118 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 DSCR9P59020 149 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 NAAAQ02083 359 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 SWI5Q1ZZU3 235 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 CEACAM16Q2WEN9 425 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 MS4A18Q3C1V0 323 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 RUNDC3AQ59EK9 446 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 ULK3Q6PHR2 472 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 H1FNTQ75WM6 255 aaPredicted RBP12.74□□□□□ -0.37
ATG4B-223ENST00000493618 DHDDSQ86SQ9 333 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 PTOV1Q86YD1 416 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 WDFY1Q8IWB7 410 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 C10orf53Q8N6V4 93 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 ANKS4BQ8N8V4 417 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 HIPK4Q8NE63 616 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 C10orf105Q8TEF2 133 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 SLC47A1Q96FL8 570 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 SORCS2Q96PQ0 1159 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 OR2M2Q96R28 347 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 EMC6Q9BV81 110 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 TMEM38AQ9H6F2 299 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 TMEM27Q9HBJ8 222 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 CRLF2Q9HC73 371 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 SELENONQ9NZV5 590 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 TESQ9UGI8 421 aaKnown RBP12.74□□□□□ -0.37
ATG4B-223ENST00000493618 CORO2BQ9UQ03 480 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 RCE1Q9Y256 329 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 ANGPT4Q9Y264 503 aa12.74□□□□□ -0.37
ATG4B-223ENST00000493618 FBN1P35555 2871 aaKnown RBP12.74□□□□□ -0.37
ATG4B-223ENST00000493618 A0A0B4J2E0 115 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 A0A1B0GX12 115 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 PRORSD1PA6NEY8 169 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 TRAF3IP2O43734 574 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-223ENST00000493618 TLX2O43763 284 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-223ENST00000493618 FZD7O75084 574 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 SERPINI2O75830 405 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 CRYAAP02489 173 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 BMP4P12644 408 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 CAPZA2P47755 286 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 IDH3GP51553 393 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-223ENST00000493618 CDH12P55289 794 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 NPRL3Q12980 569 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 CARTPTQ16568 116 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 CYP51A1Q16850 503 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 TMEM249Q2WGJ8 235 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 C1QTNF12Q5T7M4 302 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 FAM91A1Q658Y4 838 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 C5orf46Q6UWT4 87 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 UEVLDQ8IX04 471 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 TMEM123Q8N131 208 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 MAGEE2Q8TD90 523 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-223ENST00000493618 CKAP2Q8WWK9 683 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 MOGAT1Q96PD6 335 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 TNFRSF13CQ96RJ3 184 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 VRK1Q99986 396 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-223ENST00000493618 KATNB1Q9BVA0 655 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 NPHS2Q9NP85 383 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 CA10Q9NS85 328 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 CRNNQ9UBG3 495 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-223ENST00000493618 LEF1Q9UJU2 399 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-223ENST00000493618 GMEB1Q9Y692 573 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 JMJD1CQ15652 2540 aa12.73□□□□□ -0.37
ATG4B-223ENST00000493618 SONP18583 2426 aaKnown RBP12.72□□□□□ -0.37
ATG4B-223ENST00000493618 A0A087WUJ7 227 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 A8MV72 311 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-223ENST00000493618 RPL36A-HNRNPH2H7BZ11 118 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 SERPINB7O75635 380 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 MFN2O95140 757 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 F12P00748 615 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-223ENST00000493618 IGLV1-44P01699 117 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 OR4A8P0C604 315 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 SLC25A16P16260 332 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 SERPINF1P36955 418 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 SH3BGRP55822 239 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-223ENST00000493618 SNRPD2P62316 118 aaKnown RBP12.72□□□□□ -0.37
ATG4B-223ENST00000493618 POU3F1Q03052 451 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-223ENST00000493618 PMS2P3Q13401 168 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 C6orf52Q5T4I8 152 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 SLC46A3Q7Z3Q1 461 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 NET1Q7Z628 596 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-223ENST00000493618 RETREG3Q86VR2 466 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 RANBP3LQ86VV4 465 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-223ENST00000493618 PIK3C3Q8NEB9 887 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 GPR32P1Q8NGA4 272 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 VANGL1Q8TAA9 524 aaPredicted RBP12.72□□□□□ -0.37
ATG4B-223ENST00000493618 TXNDC15Q96J42 360 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 MAGEB18Q96M61 343 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 MCHR1Q99705 422 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 ARHGDIGQ99819 225 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 ASPNQ9BXN1 380 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 ZNF385DQ9H6B1 395 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 MED29Q9NX70 200 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 NDUFAF1Q9Y375 327 aa12.72□□□□□ -0.37
ATG4B-223ENST00000493618 CPSF4LA6NMK7 179 aaKnown RBP12.71□□□□□ -0.37
ATG4B-223ENST00000493618 HMGB1P1B2RPK0 211 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-223ENST00000493618 ANGPT2O15123 496 aa12.71□□□□□ -0.37
ATG4B-223ENST00000493618 AKAP8O43823 692 aaKnown RBP12.71□□□□□ -0.37
ATG4B-223ENST00000493618 ZNF16P17020 682 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-223ENST00000493618 AHCYP23526 432 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms