RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ACOT7LQ6ZUV0 252 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 TCF7L1Q9HCS4 588 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF443Q9Y2A4 671 aaPredicted RBP10.71□□□□□ -0.69
HDAC4-210ENST00000493582 PLEKHA6Q9Y2H5 1048 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 CACNA1CQ13936 2221 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 TRAPPC13A5PLN9 417 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 POM121BA6NF01 834 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 H7C4K7 107 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 K7ESM1 405 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 RPP14O95059 124 aaKnown RBP10.71□□□□□ -0.69
HDAC4-210ENST00000493582 CD8AP01732 235 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 HEXAP06865 529 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 CASRP41180 1078 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 GFOD2Q3B7J2 385 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 FAM46CQ5VWP2 391 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 FIP1L1Q6UN15 594 aaKnown RBP10.71□□□□□ -0.69
HDAC4-210ENST00000493582 LCTLQ6UWM7 567 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 ZNF836Q6ZNA1 936 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 DPPA4Q7L190 304 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 SKA3Q8IX90 412 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 FIBINQ8TAL6 211 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 C14orf79Q96F83 325 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 NKX3-1Q99801 234 aaPredicted RBP10.71□□□□□ -0.69
HDAC4-210ENST00000493582 NAA11Q9BSU3 229 aaPredicted RBP10.71□□□□□ -0.69
HDAC4-210ENST00000493582 RSRP1Q9BUV0 290 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 AICDAQ9GZX7 198 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 SLITRK2Q9H156 845 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 KCNK15Q9H427 330 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 SEBOXQ9HB31 216 aaPredicted RBP10.71□□□□□ -0.69
HDAC4-210ENST00000493582 ACKR4Q9NPB9 350 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 HAO2Q9NYQ3 351 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 NCDNQ9UBB6 729 aa10.71□□□□□ -0.69
HDAC4-210ENST00000493582 MDC1Q14676 2089 aaKnown RBP10.71□□□□□ -0.7
HDAC4-210ENST00000493582 TCF20Q9UGU0 1960 aaKnown RBP10.71□□□□□ -0.7
HDAC4-210ENST00000493582 TRAV18A0A075B6X5 111 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 A0A1W2PR48 441 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 C1orf196B1AJZ1 125 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 LEFTY1O75610 366 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 CSF1P09603 554 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 AKAIN1P0CW23 69 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 NDUFS1P28331 727 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 ZNF345Q14585 488 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 TGIF1Q15583 401 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 ZNF658BQ4V348 819 aaPredicted RBP10.71□□□□□ -0.7
HDAC4-210ENST00000493582 LDLRAD1Q5T700 205 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 FRRS1Q6ZNA5 592 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 DNM1P46Q6ZS02 220 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 SLC35F2Q8IXU6 374 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 OR1J2Q8NGS2 313 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 OR2A12Q8NGT7 310 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 ADAMTS15Q8TE58 950 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 C2orf15Q8WU43 125 aaKnown RBP10.71□□□□□ -0.7
HDAC4-210ENST00000493582 ARL11Q969Q4 196 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 SEC11CQ9BY50 192 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 ZDHHC5Q9C0B5 715 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 KLF15Q9UIH9 416 aa10.71□□□□□ -0.7
HDAC4-210ENST00000493582 A0A0A6YYD5 115 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 XRCC3O43542 346 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 LY86O95711 162 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 PMS2P2O95744 297 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 OR2T7P0C7T2 308 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 CALCBP10092 127 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 SDHAP31040 664 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 ACTA2P62736 377 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 ACTG2P63267 376 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 ILF3Q12906 894 aaKnown RBP eCLIP10.7□□□□□ -0.72e-8■□□□□ 8.2
HDAC4-210ENST00000493582 INPP5JQ15735 1006 aaPredicted RBP10.7□□□□□ -0.7
HDAC4-210ENST00000493582 TMEM64Q6YI46 380 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 SYS1Q8N2H4 156 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 OR56A1Q8NGH5 318 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 OR2T27Q8NH04 317 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 DOK4Q8TEW6 326 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 TMED6Q8WW62 240 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 CDS1Q92903 461 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 CLCC1Q96S66 551 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 GAL3ST1Q99999 423 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 SFXN1Q9H9B4 322 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 WBP1LQ9NX94 342 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 HS3ST2Q9Y278 367 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 ZNF281Q9Y2X9 895 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 NUP210Q8TEM1 1887 aaPredicted RBP10.7□□□□□ -0.7
HDAC4-210ENST00000493582 HEATR5BQ9P2D3 2071 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 M0QYG6 137 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 SULT2B1O00204 365 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 FGF16O43320 207 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 RPN2P04844 631 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 APEHP13798 732 aaKnown RBP10.7□□□□□ -0.7
HDAC4-210ENST00000493582 SELLP14151 372 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 AKR1A1P14550 325 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 MNDAP41218 407 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 OR1Q1Q15612 314 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 LIPNQ5VXI9 398 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 STEAP1BQ6NZ63 245 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 USP50Q70EL3 339 aaPredicted RBP10.7□□□□□ -0.7
HDAC4-210ENST00000493582 CDK20Q8IZL9 346 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 OR2L13Q8N349 312 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 OR5AP2Q8NGF4 316 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 OR5M8Q8NGP6 311 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 NUBPLQ8TB37 319 aa10.7□□□□□ -0.7
HDAC4-210ENST00000493582 CNN2Q99439 309 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms