RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 PRRG4Q9BZD6 226 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 NDEL1Q9GZM8 345 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 PRDM14Q9GZV8 571 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 RASSF4Q9H2L5 321 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 RIBC2Q9H4K1 309 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 C8orf4Q9NR00 106 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 PAQR5Q9NXK6 330 aaPredicted RBP11.99□□□□□ -0.49
MSH6-208ENST00000493177 USE1Q9NZ43 259 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 SEC14L4Q9UDX3 406 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 MCTS1Q9ULC4 181 aaKnown RBP11.99□□□□□ -0.49
MSH6-208ENST00000493177 MPDZO75970 2070 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 C11orf98E9PRG8 122 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 DVL2O14641 736 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 KLF4O43474 513 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 EIF1BO60739 113 aaKnown RBP11.98□□□□□ -0.49
MSH6-208ENST00000493177 SOX14O95416 240 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 ALPLP05186 524 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 ASAH2BP0C7U1 165 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 ADORA3P0DMS8 318 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 PRF1P14222 555 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 CDH2P19022 906 aaPredicted RBP11.98□□□□□ -0.49
MSH6-208ENST00000493177 BMP5P22003 454 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 AHCYP23526 432 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 SSTR2P30874 369 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 RAD23AP54725 363 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 COX10Q12887 443 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 ZIK1Q3SY52 487 aaPredicted RBP11.98□□□□□ -0.49
MSH6-208ENST00000493177 ZBED5Q49AG3 693 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 ACSF3Q4G176 576 aaPredicted RBP11.98□□□□□ -0.49
MSH6-208ENST00000493177 KDM4DQ6B0I6 523 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 KLHL17Q6TDP4 642 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 RASSF6Q6ZTQ3 369 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 H1FNTQ75WM6 255 aaPredicted RBP11.98□□□□□ -0.49
MSH6-208ENST00000493177 P4HA3Q7Z4N8 544 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 PACRGLQ8N7B6 248 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 TMEM99Q8N816 258 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 SCAIQ8N9R8 606 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 ROBO4Q8WZ75 1007 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 CPNE4Q96A23 557 aaPredicted RBP11.98□□□□□ -0.49
MSH6-208ENST00000493177 TUBA1CQ9BQE3 449 aa11.98□□□□□ -0.49
MSH6-208ENST00000493177 MRPL39Q9NYK5 338 aaKnown RBP11.98□□□□□ -0.49
MSH6-208ENST00000493177 CLCA1A8K7I4 914 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 PLPP3O14495 311 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 RNF13O43567 381 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 DNPH1O43598 174 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 SERPINI2O75830 405 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 RCBTB2O95199 551 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 IGFBP1P08833 259 aaPredicted RBP11.97□□□□□ -0.49
MSH6-208ENST00000493177 OSMP13725 252 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 KLK2P20151 261 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 RPL4P36578 427 aaKnown RBP11.97□□□□□ -0.49
MSH6-208ENST00000493177 VHLP40337 213 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 AQP2P41181 271 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 PON3Q15166 354 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 SLC25A35Q3KQZ1 300 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 SLC36A3Q495N2 470 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 TMEM225Q6GV28 225 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 SMARCD3Q6STE5 483 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 PAQR6Q6TCH4 344 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 CD300LDQ6UXZ3 194 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 ZNF620Q6ZNG0 422 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 OR52L1Q8NGH7 329 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 MOSPD2Q8NHP6 518 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 TEX47Q8TBZ9 253 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 LIPHQ8WWY8 451 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 SAMD8Q96LT4 415 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 UCN2Q96RP3 112 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 SPOCK3Q9BQ16 436 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 OR52D1Q9H346 318 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 EGLN3Q9H6Z9 239 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 TBC1D23Q9NUY8 699 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 KLHL13Q9P2N7 655 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 IL20RAQ9UHF4 553 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 ENOPH1Q9UHY7 261 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 TMEFF2Q9UIK5 374 aaPredicted RBP11.97□□□□□ -0.49
MSH6-208ENST00000493177 SIGLEC7Q9Y286 467 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 B3GALT5Q9Y2C3 310 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 CDH10Q9Y6N8 788 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 NBPF19A0A087WUL8 3843 aa11.97□□□□□ -0.49
MSH6-208ENST00000493177 UTP20O75691 2785 aaKnown RBP11.96□□□□□ -0.49
MSH6-208ENST00000493177 KIAA1549Q9HCM3 1950 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 AQP7P3A6NL99 342 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 SMAD9O15198 467 aaKnown RBP11.96□□□□□ -0.49
MSH6-208ENST00000493177 PTP4A3O75365 173 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 TOXO94900 526 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 NDUFB2O95178 105 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 ZNF26P17031 533 aaPredicted RBP11.96□□□□□ -0.49
MSH6-208ENST00000493177 SLC6A6P31641 620 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 UQCRC1P31930 480 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 AGFG1P52594 562 aaKnown RBP11.96□□□□□ -0.49
MSH6-208ENST00000493177 PRPS1P60891 318 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 TLE4Q04727 773 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 RPL18Q07020 188 aaKnown RBP11.96□□□□□ -0.49
MSH6-208ENST00000493177 PUDPQ08623 228 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 C1DQ13901 141 aaKnown RBP11.96□□□□□ -0.49
MSH6-208ENST00000493177 ZNF239Q16600 458 aaKnown RBP11.96□□□□□ -0.49
MSH6-208ENST00000493177 RFX4Q33E94 735 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 ANKDD1AQ495B1 522 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 ALG10Q5BKT4 473 aa11.96□□□□□ -0.49
MSH6-208ENST00000493177 CLEC12AQ5QGZ9 265 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms